Commit 970beffe authored by Sander Bollen's avatar Sander Bollen
Browse files

vcfstats env

parent 92cff2bb
Pipeline #2590 failed with stages
in 7 minutes and 48 seconds
...@@ -31,6 +31,8 @@ test_dry_run: ...@@ -31,6 +31,8 @@ test_dry_run:
stage: dry-run stage: dry-run
# this requires a priviliged docker container.
# most docker runners will not do this
test_integration_singularity: test_integration_singularity:
before_script: before_script:
- apt-get update && apt-get install -y python3-pip - apt-get update && apt-get install -y python3-pip
......
...@@ -25,14 +25,13 @@ dependencies: ...@@ -25,14 +25,13 @@ dependencies:
- gst-plugins-base=1.8.0=0 - gst-plugins-base=1.8.0=0
- gstreamer=1.8.0=1 - gstreamer=1.8.0=1
- humanfriendly=4.4=py36_0 - humanfriendly=4.4=py36_0
- icu=58.2=0
- jpeg=9b=2 - jpeg=9b=2
- libffi=3.2.1=3 - libffi=3.2.1=3
- libiconv=1.15 - libiconv=1.15
- libpng=1.6.34=0 - libpng=1.6.34=0
- libxcb=1.12=1 - libxcb=1.12=1
- libxml2=2.9.7=0 - libxml2=2.9.7=0
- matplotlib=2.1.2=py36_0 - matplotlib=2.1.2
- ncurses=5.9=10 - ncurses=5.9=10
- numpy=1.14.1=py36_blas_openblas_200 - numpy=1.14.1=py36_blas_openblas_200
- openblas=0.2.20=7 - openblas=0.2.20=7
......
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