Commit 2f0c42d6 authored by van den Berg's avatar van den Berg
Browse files

Add singularity to gitlab-ci paths

parent 31473ada
Pipeline #4708 failed with stages
in 24 minutes and 51 seconds
......@@ -51,7 +51,7 @@ test_integration:
script:
- source ${CONDA_SH}
- conda activate hutspot-pipeline
- export PATH=${PATH}:${CONDA_EXTRA_PATH}
- export PATH=${PATH}:${CONDA_EXTRA_PATH}:${SINGULARITY_PATH}
- py.test --tag integration --basetemp ${BASETEMP} --keep-workflow-wd
tags:
- slurm
......@@ -63,7 +63,7 @@ test_functional:
script:
- source ${CONDA_SH}
- conda activate hutspot-pipeline
- export PATH=${PATH}:${CONDA_EXTRA_PATH}
- export PATH=${PATH}:${CONDA_EXTRA_PATH}:${SINGULARITY_PATH}
- py.test --tag functional --basetemp ${BASETEMP} --keep-workflow-wd
tags:
- slurm
......
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