Developing towards v0.0.6 (v0.0.6.dev1)
* General changes in v0.0.6.dev1: * Tools that take a list of files as their argument (through the -i option or as positionals) now explicitly support glob patterns. This means they will interpret '*' and '?' characters as wildcards for 'zero or more characters' and 'any one character', respectively. On Unix-like systems this is generally done by the shell, but on Windows one had to specify every file name completely. * BGEstimate v1.1.1: * Added option -p/--profiles which can be used to provide a previously created background noise profiles file. BGEstimate will read starting values from this file instead of assuming zero noise. * BGMerge v1.0.2: * Small code changes to facilitate explicit glob pattern matching support. * Pipeline v1.0.1: * The Pipeline tool will no longer check the existence of the files specified for the -S/--in-samples option; instead, this is left to the downstream tools to find out, consistent with how this works with the other input file options. * Allelevis v2.0.1: * Added tooltip support to HTML visualisations. Moving the mouse pointer over a node or edge in the graph now displays a tooltip giving allele names and sample counts. * Stuttermodelvis v2.0.1: * Changed the unit in the horizontal axis title from 'bp' to 'nt'. * Library v1.0.1: * Updated some of the comments describing the sections.
Showing with 196 additions and 66 deletions