1. 19 Mar, 2019 1 commit
    • Hoogenboom, Jerry's avatar
      TSSV v2.0.0 · bf7a9aff
      Hoogenboom, Jerry authored
        - Removed dependency on external tssv package (it is no longer compatible).
        - Greatly increased performance by deduplicating the input reads.
        - Removed the -q/--is-fastq option in favour of automatic detection.
        - Changed the default value for -m/--mismatches from 0.08 to 0.1.
        - Changed the default value for -n/--indel-score from 1 to 2.
        - Added the -X/--no-deduplicate option to disable deduplication.
        - Fixed potential crash that could occur under very specific circumstances.