Commit 2d1fffde authored by Hoogenboom, Jerry's avatar Hoogenboom, Jerry
Browse files

Fix crash in Samplevis HTML visualisations

Fixed:
* Fixed a javascript crash in Samplevis HTML Visualisations.
* Converted two unexpected tab characters to spaces in README.rst.

Improved:
* Samplestats will now sort the output by marker name.
parent 9ed2f3d1
......@@ -82,8 +82,8 @@ Changelog
v1.5
- Changed column names 'name' and 'allele' to 'marker' and 'sequence',
respectively. WARNING: Stuttermark is now INCOMPATIBLE with output
from TSSV but made compatible with TSSV-Lite instead.
respectively. WARNING: Stuttermark is now INCOMPATIBLE with output
from TSSV but made compatible with TSSV-Lite instead.
v1.4
- Stuttermark now accepts raw sequences and allele names as input, which
......
......@@ -460,7 +460,7 @@ def compute_stats(infile, outfile, min_reads,
# Write results.
outfile.write("\t".join(
column_names[new_order[i]] for i in range(len(column_names))) + "\n")
for marker in data:
for marker in sorted(data):
if filter_action == "combine":
have_combined = False
combined = [""] * len(column_names)
......
......@@ -355,7 +355,7 @@
var linebreak = "\n";
var data_format = {};
var data_values = [];
var mising_markers = [];
var missing_markers = [];
var fileName = "graph";
var stamp = 0;
var userSelected = [];
......
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