Commits · 8abf2552052ceea0c60497d859e385ebcaaae70c · Chouaref / Snakemake_ATAC_2020

08 Dec, 2020 1 commit
- Snakefile and units.tsv changed · 8abf2552
  WJH58 authored Dec 08, 2020
  
  8abf2552
01 Dec, 2020 1 commit
- units.tsv and snakefile adapter for real data · 54d94a31
  WJH58 authored Dec 01, 2020
  
  54d94a31
27 Nov, 2020 1 commit
- added params under rule peak_calling · 8269c82d
  WJH58 authored Nov 27, 2020
  
  8269c82d
23 Nov, 2020 3 commits
- Successuful running on mac · c0085bb1
  WJH58 authored Nov 23, 2020
  
  c0085bb1
- trimmed_fastqc debugged · c5de0d34
  WJH58 authored Nov 23, 2020
  
  c5de0d34
- trimmed_fastqc debug · 2e90808e
  WJH58 authored Nov 23, 2020
  
  2e90808e
20 Nov, 2020 2 commits
- unmute units and BED · f411b85c
  WJH58 authored Nov 20, 2020
  
  f411b85c
- conda file corrected · 07eacb09
  WJH58 authored Nov 20, 2020
  
  07eacb09
19 Nov, 2020 1 commit
- mapping rule argument annotation · ef84f592
  WJH58 authored Nov 19, 2020
  
  ef84f592
17 Nov, 2020 5 commits
- put comments on trimmomatic · a35f703d
  WJH58 authored Nov 17, 2020
  
  a35f703d
- solved an error in rule trimmomatic · c6afcd22
  WJH58 authored Nov 17, 2020
  
  c6afcd22
- bowtiw2 version changed again · fcde192a
  WJH58 authored Nov 17, 2020
  
  fcde192a
- bowtie2 version changed · 954d4052
  WJH58 authored Nov 17, 2020
  
  954d4052
- Working pipeline until trimmomatic · 60251e93
  WJH58 authored Nov 17, 2020
  
  60251e93
16 Nov, 2020 1 commit
- trimmomatic added · 71eab569
  WJH58 authored Nov 16, 2020
  
  71eab569
13 Nov, 2020 3 commits
- add scripts necessary for shark · c7001b9f
  WJH58 authored Nov 13, 2020
  
  c7001b9f
- working pipeline for fastqc and index_genome · 3f384cd7
  WJH58 authored Nov 13, 2020
  
  3f384cd7
- Initial commit · 4eb7c33d
  Jihed Chouaref authored Nov 13, 2020
  
  4eb7c33d