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Chouaref
Snakemake_ATAC_2020
Commits
54d94a31bb7932500ba126069e7148eeb5536d7f
Switch branch/tag
Snakemake_ATAC_2020
01 Dec, 2020
1 commit
units.tsv and snakefile adapter for real data
· 54d94a31
WJH58
authored
Dec 01, 2020
54d94a31
27 Nov, 2020
1 commit
added params under rule peak_calling
· 8269c82d
WJH58
authored
Nov 27, 2020
8269c82d
23 Nov, 2020
3 commits
Successuful running on mac
· c0085bb1
WJH58
authored
Nov 23, 2020
c0085bb1
trimmed_fastqc debugged
· c5de0d34
WJH58
authored
Nov 23, 2020
c5de0d34
trimmed_fastqc debug
· 2e90808e
WJH58
authored
Nov 23, 2020
2e90808e
20 Nov, 2020
2 commits
unmute units and BED
· f411b85c
WJH58
authored
Nov 20, 2020
f411b85c
conda file corrected
· 07eacb09
WJH58
authored
Nov 20, 2020
07eacb09
19 Nov, 2020
1 commit
mapping rule argument annotation
· ef84f592
WJH58
authored
Nov 19, 2020
ef84f592
17 Nov, 2020
5 commits
put comments on trimmomatic
· a35f703d
WJH58
authored
Nov 17, 2020
a35f703d
solved an error in rule trimmomatic
· c6afcd22
WJH58
authored
Nov 17, 2020
c6afcd22
bowtiw2 version changed again
· fcde192a
WJH58
authored
Nov 17, 2020
fcde192a
bowtie2 version changed
· 954d4052
WJH58
authored
Nov 17, 2020
954d4052
Working pipeline until trimmomatic
· 60251e93
WJH58
authored
Nov 17, 2020
60251e93
16 Nov, 2020
1 commit
trimmomatic added
· 71eab569
WJH58
authored
Nov 16, 2020
71eab569
13 Nov, 2020
3 commits
add scripts necessary for shark
· c7001b9f
WJH58
authored
Nov 13, 2020
c7001b9f
working pipeline for fastqc and index_genome
· 3f384cd7
WJH58
authored
Nov 13, 2020
3f384cd7
Initial commit
· 4eb7c33d
Jihed Chouaref
authored
Nov 13, 2020
4eb7c33d
