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Commit d3011c41 authored by JihedC's avatar JihedC
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corrected some rules and improved readability of the Snakefile

parent 817cbc15
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ATAC-seq_pipeline/config.yaml
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......@@ -47,6 +47,8 @@ macs2:
outdir: "results/macs2"
# bamCoverage
# binSize parameters is set to 1000bp to test quickly the pipeline. Change to a lower value with real samples.
bamCoverage:
effectiveGenomeSize: "2652783500"
normalization: "RPKM"
binSize: "1000"
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