trimmed_fastqc debugged

c5de0d34 · WJH58 · 2e90808e · c5de0d34
Commit c5de0d34 authored Nov 23, 2020 by WJH58
--- a/ATAC-seq_pipeline/snakefile
+++ b/ATAC-seq_pipeline/snakefile
@@ -131,6 +131,8 @@ rule trimmed_fastqc:
        reverse_reads   = WORKING_DIR + "trimmed/{samples}_reverse.fastq.gz"
    output:
        RESULT_DIR + "fastqc/{samples}_{R}_trimmed_fastqc.html"
+    log:
+        RESULT_DIR + "logs/fastqc/{samples}.trimmed_fastqc.log"
    params:
        RESULT_DIR + "fastqc/"
    conda: