Commits · 60d88d4984630371ff5837cd823d203779dfbf86 · hem / hamlet

22 May, 2019 1 commit
- Rename report output since it is a reserved key · 60d88d49
  van den Berg authored May 22, 2019
  
  60d88d49
09 May, 2018 11 commits
- Add overview tables to report · e44137f1
  bow authored May 09, 2018
  
  e44137f1
- Update base config · 26d901da
  bow authored May 09, 2018
  
  26d901da
- Fix wrong table tags in report · b328dffe
  bow authored May 09, 2018
  
  b328dffe
- Update README · 2e1798ec
  bow authored May 09, 2018
  
  2e1798ec
- Update README · a71d301b
  bow authored May 09, 2018
  
  a71d301b
- Fix graph errors in README · a690adc0
  bow authored May 09, 2018
  
  a690adc0
- Revert "Try old graph in README" · 1fc57491
  bow authored May 09, 2018
```
This reverts commit 943a1565.
```
  1fc57491
- Try old graph in README · 943a1565
  bow authored May 09, 2018
  
  943a1565
- Update graph in README · 0282477d
  bow authored May 09, 2018
  
  0282477d
- Update README · 5e7b54c3
  bow authored May 09, 2018
  
  5e7b54c3
- Update rules resolution for fresh runs · e8aa74d9
  bow authored May 09, 2018
  
  e8aa74d9
08 May, 2018 16 commits
- Fix RUN_NAME retrieval · 60f20931
  bow authored May 08, 2018
  
  60f20931
- Add run_name to base config · 5c46df19
  bow authored May 08, 2018
  
  5c46df19
- Set exon_min_ratio from config · 8a2796b0
  bow authored May 08, 2018
  
  8a2796b0
- Update base config template · 3e123cc1
  bow authored May 08, 2018
  
  3e123cc1
- Set repo directory to Snakefile directory · d009d40c
  bow authored May 08, 2018
  
  d009d40c
- Rename rule for consistency · 6940c889
  bow authored May 08, 2018
  
  6940c889
- Remove debug statement · 846ac47e
  bow authored May 08, 2018
  
  846ac47e
- Add fusion svg to summary rule requirement · 23e1edeb
  bow authored May 08, 2018
  
  23e1edeb
- Add conda env to report creation rule · d6312711
  bow authored May 08, 2018
  
  d6312711
- Fix wrong imgs path · fe46da99
  bow authored May 08, 2018
  
  fe46da99
- Add create_report rule · bc6d6b7a
  bow authored May 08, 2018
  
  bc6d6b7a
- Update summary script · a2104e00
  bow authored May 08, 2018
  
  a2104e00
- Expose exon ratio parameter as rule params · ca3a7b6e
  bow authored May 08, 2018
  
  ca3a7b6e
- Update summary script · 977078a5
  bow authored May 08, 2018
  
  977078a5
- Add png to fsnviz output · b66a3926
  bow authored May 08, 2018
  
  b66a3926
- Update summary script · be72b712
  bow authored May 08, 2018
  
  be72b712
06 May, 2018 2 commits
- Rename itd tools based on upstream changes · ea202861
  bow authored May 06, 2018
  
  ea202861
- Update itd plotting script shell command · 9849bd3e
  bow authored May 06, 2018
  
  9849bd3e
04 May, 2018 6 commits
- Add variant plots to summary · e06ac1e0
  bow authored May 04, 2018
  
  e06ac1e0
- Update default run name · 52e8c63a
  bow authored May 04, 2018
  
  52e8c63a
- Add default RUN_NAME variable · 55c08669
  bow authored May 04, 2018
  
  55c08669
- Rename combine_stats to create_summary · 2b78b7d8
  bow authored May 04, 2018
  
  2b78b7d8
- Update final rule for packaging results · 2b650477
  bow authored May 04, 2018
  
  2b650477
- Initial rule for packaging results · a7dd3c44
  bow authored May 04, 2018
  
  a7dd3c44
03 May, 2018 4 commits
- Update dirty marker · 127f5d91
  bow authored May 03, 2018
  
  127f5d91
- Add git status info to pipeline version · 6bf43bd7
  bow authored May 03, 2018
  
  6bf43bd7
- Update git sha1 retrieval · 1fad7bcc
  bow authored May 03, 2018
  
  1fad7bcc
- Add pipeline version to final stats output · 8ea8d670
  bow authored May 03, 2018
  
  8ea8d670