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hem
hamlet
Commits
7d1116d9
Unverified
Commit
7d1116d9
authored
May 11, 2021
by
van den Berg
Committed by
GitHub
May 11, 2021
Browse files
Merge pull request
#14
from LUMC/issue-12
Fix
#12
- SingularityCE version not recognised
parents
4d160716
ec271f8c
Changes
6
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Inline
Side-by-side
test/test_expression.yml
View file @
7d1116d9
...
...
@@ -49,8 +49,8 @@
command
:
>
singularity --version
stdout
:
contains
:
-
"
singularity
version
3"
contains
_regex
:
-
"
singularity
(-ce)?
version
3"
-
name
:
test-expression-integration-HEL
tags
:
...
...
test/test_fusion.yml
View file @
7d1116d9
...
...
@@ -75,8 +75,8 @@
command
:
>
singularity --version
stdout
:
contains
:
-
"
singularity
version
3"
contains
_regex
:
-
"
singularity
(-ce)?
version
3"
-
name
:
test-fusion-integration-NB-4-dry-run
tags
:
...
...
test/test_hamlet.yml
View file @
7d1116d9
...
...
@@ -47,8 +47,8 @@
command
:
>
singularity --version
stdout
:
contains
:
-
"
singularity
version
3"
contains
_regex
:
-
"
singularity
(-ce)?
version
3"
-
name
:
test-hamlet-frankenstein-integration
tags
:
...
...
test/test_itd.yml
View file @
7d1116d9
...
...
@@ -53,8 +53,8 @@
command
:
>
singularity --version
stdout
:
contains
:
-
"
singularity
version
3"
contains
_regex
:
-
"
singularity
(-ce)?
version
3"
-
name
:
test-itd-MV4-11-flt3
tags
:
...
...
test/test_qc_seq.yml
View file @
7d1116d9
...
...
@@ -29,8 +29,8 @@
command
:
>
singularity --version
stdout
:
contains
:
-
"
singularity
version
3"
contains
_regex
:
-
"
singularity
(-ce)?
version
3"
-
name
:
test-qc-single
tags
:
...
...
test/test_snv_indels.yml
View file @
7d1116d9
...
...
@@ -43,8 +43,8 @@
command
:
>
singularity --version
stdout
:
contains
:
-
"
singularity
version
3"
contains
_regex
:
-
"
singularity
(-ce)?
version
3"
-
name
:
test-p53-integration-NB-4
tags
:
...
...
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