Issues · capture-lumc

Look into using picard metrics in stead of calculating our own mapping statistics

hutspot#19 · opened Feb 26, 2018 by Sander Bollen Colibri on API Infra
- CLOSED
- 2
updated Dec 09, 2020
Pipeline configuration file in stead of --config values

hutspot#9 · opened Jan 22, 2018 by Sander Bollen Colibri on API Infra
- CLOSED
- 1
updated Dec 09, 2020
Create stats.tsv from stats.json

hutspot#4 · opened Jan 10, 2018 by Sander Bollen Colibri on API Infra 2h
- CLOSED
- 0
updated May 31, 2019
Copy .bai to .bam.bai

hutspot#3 · opened Nov 14, 2017 by Sander Bollen Colibri on API Infra 4h
- CLOSED
- 0
updated Apr 30, 2019
Handle cases without any regions of interest

hutspot#10 · opened Jan 22, 2018 by Sander Bollen Colibri on API Infra
- CLOSED
- 0
updated Mar 08, 2018
Scattering queue vs. snakemake concordance test.

hutspot#14 · opened Feb 05, 2018 by Laros Colibri on API Infra
- CLOSED
- 1
updated Mar 08, 2018
Add refflat coverage in pipeline

hutspot#8 · opened Jan 22, 2018 by Sander Bollen Colibri on API Infra
- CLOSED
- 0
updated Mar 06, 2018
Code review.

hutspot#15 · opened Feb 05, 2018 by Laros Colibri on API Infra
- CLOSED
- 1
updated Mar 02, 2018
QC-db metadata structure.

hutspot#11 · opened Feb 05, 2018 by Laros Colibri on API Infra
- CLOSED (MOVED)
- 0
updated Feb 22, 2018
Additional QC.

hutspot#16 · opened Feb 05, 2018 by Laros Colibri on API Infra
- CLOSED (MOVED)
- 0
updated Feb 16, 2018
Connection transfer -> cerana.

hutspot#12 · opened Feb 05, 2018 by Laros Colibri on API Infra
- CLOSED (MOVED)
- 0
updated Feb 16, 2018
X.509 pipeline

hutspot#13 · opened Feb 05, 2018 by Laros Colibri on API Infra
- CLOSED (MOVED)
- 1
updated Feb 16, 2018