Merge branch 'master' of git.lumc.nl:courses/scriptingcourse

README.md

@@ -19,14 +19,11 @@ course before.
 
 ## Coordinates
 
-- Date: 9-10 May, 2019
-- Time: 9:00 - 17:00
-- Location: J1-84
+- Date: TBA
+- Time: TBA
+- Location: TBA
 - Teachers:
-  - Mihai Lefter
-  - Jonathan Vis
-  - Yassene Mohammed
-  - Magnus Palmblad
+  - TBA
 
 - Registration via www.medgencentre.nl. Direct access to the 
 [registration form](https://forms.lumc.nl/lumc2/SCRIPTINGcourse).
@@ -55,12 +52,12 @@ course before.
 | 09:00 | [Processes](https://git.lumc.nl/courses/scriptingcourse/wikis/files-most-recent/processes.pdf)   |
 | 09:30 | [Practical 4](https://git.lumc.nl/courses/scriptingcourse/wikis/files-most-recent/processes_practical.pdf)   |
 | 10:00 | Coffee break   |
-| 10:15 | [Regular expressions](https://git.lumc.nl/courses/scriptingcourse/raw/master/regex/regular_expressions_lecture_20180528_v5_all_slides_y.pdf)   |
+| 10:15 | [Regular expressions](https://git.lumc.nl/courses/scriptingcourse/raw/master/regex/regular_expressions_lecture_20190509_v6_stud_slides_y.pdf)   |
 | 11:00 | Practical 5   |
 | 12:00 | Lunch   |
 | 13:00 | Practical 6   |
-| 13:30 | [AWK](https://git.lumc.nl/courses/scriptingcourse/wikis/files-most-recent/awk.pdf)   |
-| 14:15 | [Practical 7](https://git.lumc.nl/courses/scriptingcourse/wikis/files-most-recent/awk_practical.pdf)   |
+| 13:30 | [AWK](https://git.lumc.nl/courses/scriptingcourse/blob/master/website/Introduction_to_AWK_2019_handouts.pdf)   |
+| 14:15 | [Practical 7](https://git.lumc.nl/courses/scriptingcourse/blob/master/website/Introduction_to_AWK_2019_handouts.pdf)   |
 | 15:45 | Wrap-up and Q&A   |
 | 16:00 | Closing   |
 

basic_scripting/Makefile

+../.submodules/presentation/Makefile
\ No newline at end of file

basic_scripting/basic_scripting.tex

@@ -4,6 +4,9 @@
 \usepackage{minted}
 \usepackage{tikz}
 \usepackage[many]{tcolorbox}
+
+\usepackage[inkscapelatex=false,inkscapearea=page]{svg}
+
 \definecolor{scriptback}{HTML}{CDECF0}
 
 \newenvironment{scriptfile}[1]
@@ -79,7 +82,7 @@
 %\renewcommand{\pause}{}
 
 % Make the title slide.
-\makeTitleSlide{\includegraphics[width=4cm]{../images/course_logo.pdf}}
+\makeTitleSlide{\includesvg[width=4cm]{../images/course_logo.svg}}
 
 % First page of the presentation.
 \section{Introduction}
@@ -597,7 +600,8 @@ $ ./quiz1.sh
   \item \textbf{((expression)) - detailed next}
  \end{itemize}
   \begin{tikzpicture}[remember picture,overlay]
-    \node[xshift=-3.3cm,yshift=-5.4cm] at (current page.north east) {\includegraphics[width=3.8cm]{../images/arithmetic.pdf}};
+    \node[xshift=-3.3cm,yshift=-5.4cm] at (current page.north east)
+{\includesvg[width=3.8cm]{../images/arithmetic.svg}};
   \end{tikzpicture}
 
 \end{pframe}

basic_scripting/beamerthemelumc.sty

+../.submodules/presentation/beamerthemelumc.sty
\ No newline at end of file

basic_scripting/logos

+../.submodules/presentation/logos
\ No newline at end of file