diff --git a/README.md b/README.md index 30ef07e810cd85c7f774e5ee991eca1ca1ec0df9..b7787252e9ecfc16d4c35059247df2e0251209fb 100644 --- a/README.md +++ b/README.md @@ -28,15 +28,26 @@ Materials The top-level directory contains materials for the following lessons: -1. Welcome ([slides](http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/01%20-%20Welcome.ipynb)) -2. Introduction to Python ([slides 1](http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/02%20-%20Introduction%20to%20Python%20(1).ipynb), [slides 2](http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/02%20-%20Introduction%20to%20Python%20(2).ipynb), [slides 3](http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/02%20-%20Introduction%20to%20Python%20(3).ipynb)) -3. More Python Goodness ([notebook 1](http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/03%20-%20More%20Python%20goodness%20(1).ipynb), [notebook 2](http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/03%20-%20More%20Python%20goodness%20(2).ipynb)) +1. Welcome ([slides][lesson_01]) +2. Introduction to Python ([slides 1][lesson_02_01], [slides 2][lesson_02_02], + [slides 3][lesson_02_03]) +3. More Python Goodness ([notebook 1][lesson_03_01], [notebook 2][lesson_03_02]) 4. Working with NumPy arrays -5. IPython Notebook ([notebook](http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/05%20-%20IPython%20Notebook.ipynb)) +5. IPython Notebook ([notebook][lesson_05]) 6. Plotting with matplotlib 7. Python for data analysis 8. Object-oriented programming -9. A sip of Biopython ([notebook 1](http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/09%20-%20A%20sip%20of%20Biopython%20(1).ipynb), [notebook 2](http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/09%20-%20A%20sip%20of%20Biopython%20(2).ipynb)) +9. A sip of Biopython ([notebook 1][lesson_09_01], [notebook 2][lesson_09_02]) + +[lesson_01]: http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/01%20-%20Welcome.ipynb +[lesson_02_01]: http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/02%20-%20Introduction%20to%20Python%20(1).ipynb +[lesson_02_02]: http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/02%20-%20Introduction%20to%20Python%20(2).ipynb +[lesson_02_03]: http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/02%20-%20Introduction%20to%20Python%20(3).ipynb +[lesson_03_01]: http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/03%20-%20More%20Python%20goodness%20(1).ipynb +[lesson_03_02]: http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/03%20-%20More%20Python%20goodness%20(2).ipynb +[lesson_05]: http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/05%20-%20IPython%20Notebook.ipynb +[lesson_09_01]: http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/09%20-%20A%20sip%20of%20Biopython%20(1).ipynb +[lesson_09_02]: http://nbviewer.ipython.org/urls/git.lumc.nl/humgen/programming-course/raw/master/09%20-%20A%20sip%20of%20Biopython%20(2).ipynb As indicated, some of the lessons are slideshows, whereas others are just notebooks we scroll through during class. The links above are all one-page