From 36b100e9b4a2c20528c235f769daddc3189d1d06 Mon Sep 17 00:00:00 2001 From: Martijn Vermaat <martijn@vermaat.name> Date: Thu, 8 Aug 2013 17:06:39 +0200 Subject: [PATCH] Update Biopython lesson --- README.md | 2 + biopython.ipynb | 499 ++++++------ data/my_blast_output.xml | 1557 +++++++++++++++++++++++++++++++++++++ styles/notebook.css | 8 +- styles/notebook.css.small | 8 +- 5 files changed, 1846 insertions(+), 228 deletions(-) create mode 100644 data/my_blast_output.xml diff --git a/README.md b/README.md index 15b2906..8637ccd 100644 --- a/README.md +++ b/README.md @@ -33,6 +33,8 @@ The top-level directory contains slides for the following lessons. 4. [More Python Goodness](http://nbviewer.ipython.org/urls/raw.github.com/LUMC/programming-course/master/more-python.ipynb) 5. [Working with NumPy arrays](http://nbviewer.ipython.org/urls/raw.github.com/LUMC/programming-course/master/numpy.ipynb) 6. [Plotting with matplotlib](http://nbviewer.ipython.org/urls/raw.github.com/LUMC/programming-course/master/matplotlib.ipynb) +7. [Object-oriented programming](http://nbviewer.ipython.org/urls/raw.github.com/LUMC/programming-course/master/classes.ipynb) +8. [A sip of Biopython](http://nbviewer.ipython.org/urls/raw.github.com/LUMC/programming-course/master/biopython.ipynb) Note: These links are to one-page renderings on [IPython Notebook Viewer](http://nbviewer.ipython.org/), see below how to get the real slideshows. diff --git a/biopython.ipynb b/biopython.ipynb index bbe9851..9dbf7fa 100644 --- a/biopython.ipynb +++ b/biopython.ipynb @@ -11,7 +11,7 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "# Biopython & Other Bioinformatics Modules\n", + "# A sip of Biopython\n", "***\n", "\n", "[Wibowo Arindrarto](mailto:w.arindrarto@lumc.nl), [Jeroen Laros](mailto:j.f.j.laros@lumc.nl), [Zuotian Tatum](mailto:z.tatum@lumc.nl), [Martijn Vermaat](mailto:m.vermaat.hg@lumc.nl)\n", @@ -27,92 +27,153 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "# Before we start ...\n", + "## Table of contents\n", "\n", - "## Python Package Index (PyPI)\n", + "1. [Prelude: Python packages and their installation](#packages)\n", + "2. [Biopython](#biopython)\n", + "3. [Working with sequences](#sequences)\n", + "4. [File I/O with Biopython](#files)\n", + "5. [Fetching from online resources: NCBI's Entrez](#entrez)\n", + "6. [Performing a remote BLAST search](#blast)\n", + "7. [Beyond Biopython](#beyond)" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "<a id=\"packages\"></a>\n", + "## Prelude: Python packages and their installation\n", + "\n", + "### Python Package Index (PyPI)\n", + "\n", + "[The Python Package Index](https://pypi.python.org/) is *the* place to find 3rd-party Python libraries (and to upload your own too).\n", + "\n", + "Remember the `pip install biopython` (or `numpy`, etc). command you ran? That source package was stored in PyPI.\n", "\n", - "*The* place to find 3rd-party Python libraries (and to upload yours too).\n", + "Some of the Python packages developed at our department are also in there:\n", "\n", - "Remember the `pip install matplotlib` (or `numpy`, etc). command you ran? That source package was stored in PyPI.\n", + "- [kMer](https://pypi.python.org/pypi/kMer): Analysis toolkit and programming library for k-mer profiles.\n", + "- [TSSV](https://pypi.python.org/pypi/tssv): Targeted characterisation of short structural variation.\n", + "- [fastools](https://pypi.python.org/pypi/fastools): Various tools for the analysis and manipulation of FASTA/FASTQ files.\n", + "- [piletools](https://pypi.python.org/pypi/piletools): Various tools for the analysis of mpileup files.\n", + "- [barcode](https://pypi.python.org/pypi/barcode): For designing NGS barcodes.\n", + "- [wiggelen](http://wiggelen.readthedocs.org/): Working with Wiggle (WIG) tracks.\n", + "- [monoseq](https://monoseq.readthedocs.org/): Pretty-printing of DNA and protein sequences.\n", "\n", - "*PSA* (bits about locally-developed tools? wiggelen, piletools, etc?)" + "For example, to install our k-mer profile toolkit:\n", + "\n", + " pip install kMer" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "# About Biopython\n", + "### Python virtual environments\n", + "\n", + "[`virtualenv`](http://www.virtualenv.org/) (with its frontend [`virtualenvwrapper`](http://virtualenvwrapper.readthedocs.org/)) is a tool for managing isolated Python environments. Its benefits are:\n", + "\n", + "1. You can have specific versions of packages installed, per environment.\n", + "2. You can install packages as non-root user.\n", + "\n", + "We list some commands to manage your virtual environments. First, creating a new one:\n", + "\n", + " $ mkvirtualenv my-environment\n", + "\n", + "Activating an environment:\n", + "\n", + " $ workon my-environment\n", + "\n", + "Whenever you have an environment activated, it is indicated by prefixing your bash prompt with the name of the environment surrounded by brackets.\n", + "\n", + "Deactivating an environment:\n", + "\n", + " $ deactivate\n", + "\n", + "Normally, `pip install` will try to install a package system-wide, for which you'd need administrator permissions. Whenever you have a virtual environment activated, `pip install` will install the package in the virtual environment automatically." + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "<a id=\"biopython\"></a>\n", + "## Biopython\n", "\n", "<img src=\"http://biopython.org/DIST/docs/tutorial/images/biopython.jpg\" />\n", "\n", - "* One of the big libraries for working with bioinformatics-related data (but not the only one)\n", - "* Open source. Ran by a team of developers from around the world under the OBF umbrella\n", - "* Mature. Started development in 1998 and still actively maintained (new releases every 3-4 months)\n", - "* Python 2.x and 3.x compatible\n", - "* Tested on multiple OS and multiple Python implementations\n", - "* Multiple publications (the whole library itself and sometimes its submodules)\n", - "* Links:\n", - " * [Homepage](http://biopython.org)\n", - " * [Development repository](http://github.com/biopython/biopython)\n", - " * [Mailing list](http://lists.open-bio.org/pipermail/biopython/)\n", - " * [Comprehensive Tutorial](http://biopython.org/DIST/docs/tutorial/Tutorial.html)" + "### About Biopython\n", + "\n", + "Biopython is one of the big libraries for working with bioinformatics-related data (but not the only one). It is *Open Source* and ran by a team of developers from around the world under the OBF umbrella.\n", + "\n", + "Development started in 1998 and it is still actively maintained with a new release every 3-4 months. The library is mature and has had multiple publications (the whole library itself and sometimes its submodules).\n", + "\n", + "Biopython is compatible with Python 2.x and 3.x and tested on multiple operating systems and Python implementations.\n", + "\n", + "Some links with more information:\n", + "\n", + "- [Biopython homepage](http://biopython.org)\n", + "- [Git development repository](http://github.com/biopython/biopython)\n", + "- [Mailing list](http://lists.open-bio.org/pipermail/biopython/)\n", + "- [Biopython Tutorial and Cookbook](http://biopython.org/DIST/docs/tutorial/Tutorial.html)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "# Inside Biopython\n", + "### Inside Biopython\n", "\n", - "* Useful objects representing various concepts (sequences, alignments, motifs, etc.) & \n", + "As one of the larger Python packages, these are some of the things provided by Biopython:\n", "\n", - "* File parsers and writers\n", - " * Sequence files: fastq, fastq, genbank, abi, sff, etc.\n", - " * Alignment files: clustal, emboss, phylip, nexus, etc.\n", - " * Sequence search outputs: BLAST, HMMER, BLAT, etc.\n", - " * Phylogenetic trees: newick, nexus, phyloxml, etc.\n", - " * Sequence motifs: AlignAce, TRANSFAC, etc.\n", - " * Others: PDB files, etc.\n", + "- Rich objects representing various concepts (e.g., sequences, alignments, motifs).\n", "\n", - "* Access to remote resources (Entrez, NCBI BLAST, etc.)\n", + "- File parsers and writers.\n", + " * Sequence files: fasta, fastq, genbank, abi, sff, etc.\n", + " * Alignment files: clustal, emboss, phylip, nexus, etc.\n", + " * Sequence search outputs: BLAST, HMMER, BLAT, etc.\n", + " * Phylogenetic trees: newick, nexus, phyloxml, etc.\n", + " * Sequence motifs: AlignAce, TRANSFAC, etc.\n", + " * Others: PDB files, etc.\n", "\n", - "* Application wrappers\n", + "- Access to remote resources (e.g., Entrez, NCBI BLAST).\n", "\n", - "* Simple-graphing tool\n", + "- Application wrappers.\n", "\n", - "* Useful simple algorithms: pairwise alignment, cluster analysis, etc.\n", + "- A simple graphing tool.\n", "\n", - "* Other useful references: codon tables, IUPAC sequences, restriction enzyme sites(?)" + "- Simple algorithms (e.g., pairwise alignment, cluster analysis).\n", + "\n", + "- References such as codon tables and IUPAC sequences." ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "# Using Biopython\n", + "### Characterizing Biopython\n", "\n", "Strengths:\n", "\n", - "- based on Python (readability, expressive constructs)\n", - "- wide range of parsers with common interfaces\n", - "- access to online resources\n", + "- Based on Python (readability, expressive constructs).\n", + "- Wide range of parsers with common interfaces.\n", + "- Access to online resources.\n", "\n", "Weaknesses:\n", "\n", - "- based on Python? (no error checks until runtime)\n", - "- not always the fastest parsers" + "- Based on Python (?) (no error checks until runtime).\n", + "- Not always the fastest parsers." ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "# The `Seq` object\n", + "<a id=\"sequences\"></a>\n", + "## Working with sequences\n", "\n", - "* The main representation of nucleotide or protein sequences\n", - "* Essentially a string, with alphabet information\n", - "* Constructor available via the `Bio.Seq` module" + "The `Seq` object is Biopython's main representation of nucleotide or protein sequences. It is essentially a string with alphabet information. Its constructor is available in the `Bio.Seq` module." ] }, { @@ -126,6 +187,15 @@ "outputs": [], "prompt_number": 8 }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "### Sequence alphabets\n", + "\n", + "Let's make our first `Seq` object." + ] + }, { "cell_type": "code", "collapsed": false, @@ -161,7 +231,7 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "Notice the bit about the alphabet. Biopython never tries to guess what alphabet your sequence is. You have to be explicit yourself (recall `import this`)." + "Notice the bit about the alphabet. Biopython never tries to guess what alphabet your sequence is in. You have to be explicit yourself (recall `import this`)." ] }, { @@ -210,7 +280,7 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "`Seq` objects are almost the same as native Python `str` objects. They have similar methods and can be used with the almost the same set of operators." + "`Seq` objects are almost the same as native Python `str` objects. They have similar methods and can be used with almost the same set of operators." ] }, { @@ -297,9 +367,9 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "# Why use `Seq`?\n", + "### Operations on sequences\n", "\n", - "The plus feature is that we get to use additional 'molecular biology' functions." + "The plus feature of the `Seq` type is that we get to use additional functions from 'molecular biology'." ] }, { @@ -429,8 +499,7 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "$\\S$ Exercise: Six-frame translation\n", - "===\n", + "### <span class=\"exercise\">Exercise: Six-frame translation</span>\n", "\n", "Write a function that takes a `Seq` object and prints all possible translation frames from it. For example, when using `CGATCGTAGCTGTAGCGCGATATATACTAGGG` as the input sequence, the output is (not necessarily in this order):\n", "\n", @@ -448,16 +517,11 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "# Storing additional information: the `SeqRecord` object" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ + "### Storing additional information\n", + "\n", "`Seq` objects are good for storing the sequence itself. But where do we store metadata such as sequence ID or interesting regions in the sequence?\n", "\n", - "For this, we use the `SeqRecord` object. It is essentially a thin wrap around the `Seq` object that also stores sequence metadata." + "For this, we use the `SeqRecord` object from the `Bio.SeqRecord` module. It is essentially a thin wrap around the `Seq` object that also stores sequence metadata." ] }, { @@ -475,7 +539,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "my_rec = SeqRecord(my_dna)" + "record = SeqRecord(my_dna)" ], "language": "python", "metadata": {}, @@ -486,7 +550,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "my_rec" + "record" ], "language": "python", "metadata": {}, @@ -506,7 +570,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "print my_rec" + "print record" ], "language": "python", "metadata": {}, @@ -531,20 +595,15 @@ "source": [ "We saw that `SeqRecord` stores a `Seq` object and other metadata such as:\n", "\n", - "* `id`: sequence ID\n", - "* `name`: sequence name, usually the same as `id`\n", - "* `description`: sequence description\n", - "* `dbxrefs`: a list of database cross references\n", + "* `id`: Sequence ID.\n", + "* `name`: Sequence name, usually the same as `id`.\n", + "* `description`: Sequence description.\n", + "* `dbxrefs`: A list of database cross references.\n", "\n", "There are also other metadata not shown here such as:\n", "\n", - "* `letter_annotation`: annotation per sequence position" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ + "* `letter_annotation`: Annotation per sequence position.\n", + "\n", "It's enough to supply only a `Seq` object when creating `SeqRecord`. However, as we saw, it's not that useful to have `<unknown id>` and `<unknown description>` as metadata. " ] }, @@ -572,7 +631,8 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "# File I/O with Biopython\n", + "<a id=\"files\"></a>\n", + "## File I/O with Biopython\n", "\n", "As mentioned before, one of Biopython's strength is its wide range of parsing support. Briefly:\n", "\n", @@ -585,14 +645,14 @@ "\n", "These parsers may not be the fastest available, but they provide a common interface of objects within their domain.\n", "\n", - "Let's take a look at the sequence file parsing as an example." + "As an example, let's take a look at parsing sequence files." ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "# Reading sequence files with `SeqIO`\n", + "### Reading sequence files with `SeqIO`\n", "\n", "The main sequence input/output functions are all contained in the `Bio.SeqIO` module. Two of the most commonly used are `Bio.SeqIO.read` and `Bio.SeqIO.parse`. They provide the same functionality, except that the former is for files containing a single sequence and the latter is for files containing multiple sequences." ] @@ -601,12 +661,14 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "# `SeqIO.read`\n", + "### `SeqIO.read`\n", + "\n", + "A simple function call that takes as input:\n", "\n", - "A simple function call that takes as is input:\n", - " * the file name *or* a file handle object pointing to your sequence, and\n", - " * the sequence file format name\n", - "and returns a single `SeqRecord` object containing our sequence of interest." + "1. The file name *or* a file handle object pointing to your sequence.\n", + "2. The sequence file format name.\n", + "\n", + "It returns a single `SeqRecord` object containing our sequence of interest." ] }, { @@ -624,7 +686,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "seq1 = SeqIO.read('data/simple.fa', 'fasta')" + "fasta_record = SeqIO.read('data/simple.fa', 'fasta')" ], "language": "python", "metadata": {}, @@ -635,7 +697,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "seq1" + "fasta_record" ], "language": "python", "metadata": {}, @@ -655,7 +717,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "print seq1" + "print fasta_record" ], "language": "python", "metadata": {}, @@ -685,7 +747,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "seq2 = SeqIO.read('data/easy.fastq', 'fastq')" + "fastq_record = SeqIO.read('data/easy.fastq', 'fastq')" ], "language": "python", "metadata": {}, @@ -696,7 +758,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "seq2" + "fastq_record" ], "language": "python", "metadata": {}, @@ -716,7 +778,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "print seq2" + "print fastq_record" ], "language": "python", "metadata": {}, @@ -740,14 +802,14 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "Of course, since the FASTQ file has additional quality information, we can now access it. In this case, the qualities are stored in `letter_annotations`" + "Of course, since the FASTQ file has additional quality information, we can now access it. In this case, the qualities are stored in `letter_annotations`." ] }, { "cell_type": "code", "collapsed": false, "input": [ - "print seq2.letter_annotations" + "print fastq_record.letter_annotations" ], "language": "python", "metadata": {}, @@ -773,7 +835,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "seq3 = SeqIO.read('data/sanger.ab1', 'abi')" + "abi_record = SeqIO.read('data/sanger.ab1', 'abi')" ], "language": "python", "metadata": {}, @@ -784,7 +846,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "print seq3" + "print abi_record" ], "language": "python", "metadata": {}, @@ -820,56 +882,34 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "# `SeqIO.parse`" + "### `SeqIO.parse`" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "`SeqIO.parse` is similar to `SeqIO.read`, but instead of returning a single `SeqRecord` object, we return a generator over the file.\n", - "\n", - "????? should we explain generators or use a simple analogy like below?\n", + "`SeqIO.parse` is similar to `SeqIO.read`, but instead of returning a single `SeqRecord` object, we can iterate over the return value to get consecutive `SeqRecord` objects.\n", "\n", - "A simple way to think about the generator in this case is that it is similar to file handles we saw on Tuesday.\n", + "This is similar to how we iterated over a filehandle to get consecutive lines:\n", "\n", " fh = open('my_file')\n", " for line in fh:\n", " print line\n", " fh.close()\n", "\n", - "However, instead of returning each line of the file, here we return a single `SeqRecord` object per iteration and we do not need to do a `close` afterwards because it is handled automatically by Biopython.\n", + "However, instead of returning each line of the file, `SeqIO.parse` returns a single `SeqRecord` object per iteration and we do not need to call `close` afterwards because it is handled automatically by Biopython.\n", "\n", - " for rec in SeqIO.parse('my_sequence.fa', 'fasta'):\n", - " print rec\n" + " for record in SeqIO.parse('my_sequence.fa', 'fasta'):\n", + " print record" ] }, { "cell_type": "code", "collapsed": false, "input": [ - "SeqIO.parse('data/parse.fastq', 'fastq')" - ], - "language": "python", - "metadata": {}, - "outputs": [ - { - "metadata": {}, - "output_type": "pyout", - "prompt_number": 162, - "text": [ - "<generator object parse at 0x45d1500>" - ] - } - ], - "prompt_number": 162 - }, - { - "cell_type": "code", - "collapsed": false, - "input": [ - "for rec in SeqIO.parse('data/parse.fastq', 'fastq'):\n", - " print rec.seq" + "for record in SeqIO.parse('data/parse.fastq', 'fastq'):\n", + " print record.seq" ], "language": "python", "metadata": {}, @@ -889,25 +929,17 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "The advantage of `SeqIO.parse` is that it allows you to handle large, multi-sequence files gracefully. The file size may well exceed your memory, but this allows us to process the records one by one." - ] - }, - { - "cell_type": "code", - "collapsed": false, - "input": [ + "The advantage of `SeqIO.parse` is that it allows you to handle large, multi-sequence files gracefully. The file size may well exceed your memory, since it allows us to process the records one by one.\n", + "\n", "`SeqIO.parse` supports the same set of formats that `SeqIO.read` supports, one example is shown below." - ], - "language": "python", - "metadata": {}, - "outputs": [] + ] }, { "cell_type": "code", "collapsed": false, "input": [ - "for rec in SeqIO.parse('data/roche.sff', 'sff'):\n", - " print rec.id, len(rec), rec.seq[:10]" + "for record in SeqIO.parse('data/roche.sff', 'sff'):\n", + " print record.id, len(record), record.seq[:10]" ], "language": "python", "metadata": {}, @@ -935,35 +967,32 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "$\\S$ Exercise: Trimming sequences from a mangled FASTQ file\n", - "===\n", + "### <span class=\"exercise\">Exercise: Trimming sequences from a mangled FASTQ file</span>\n", "\n", - "* From the interleaved FASTQ file `data/mangled.fq`, print all sequences of the first read pairs after trimming off their first five nucleotides\n", - "* Hint: first pair and second pair records are marked with `/1` and `/2` respectively" + "* From the interleaved FASTQ file `data/mangled.fq`, print all sequences of the first read pairs after trimming off their first five nucleotides.\n", + "* **Hint:** first pair and second pair records are marked with `/1` and `/2`, respectively." ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "# Writing sequence files with `SeqIO.write`\n", + "### Writing sequence files with `SeqIO`\n", "\n", "Often, after manipulating parsed sequences, we need to write it back to a file. This is accomplished using `SeqIO.write` in Biopython. The function takes as its input:\n", "\n", - "* an iterable returning `SeqRecord` objects (generators and lists are examples of iterables)\n", + "1. An iterable returning `SeqRecord` objects (generators and lists are examples of iterables).\n", + "2. A filename to write to *or* a file-like handle.\n", + "3. The format to write to.\n", "\n", - "* a filename to write to or a file-like handle\n", - "\n", - "* the format to write to\n", - "\n", - "And returns the number of sequences written, while writing to the actual file in the process." + "It returns the number of sequences written." ] }, { "cell_type": "code", "collapsed": false, "input": [ - "in_seqs = SeqIO.parse('data/parse.fastq', 'fastq')" + "records = SeqIO.parse('data/parse.fastq', 'fastq')" ], "language": "python", "metadata": {}, @@ -974,7 +1003,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "SeqIO.write(in_seqs, 'my_sequences.fa', 'fasta')" + "SeqIO.write(records, 'my_sequences.fa', 'fasta')" ], "language": "python", "metadata": {}, @@ -994,36 +1023,32 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "Note that we're free to write the output format as any format supported by `SeqIO.write` so long as the information is adequate. In this case, reading the `my_sequences.fa` and writing it back to `parse.fastq` would not be possible since we have discarded the quality information." - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "Additionally, the sequence records are written one-by-one to the file (courtesy of `SeqIO.parse`). So even if the `data/parse.fastq` is 10GB large, we can run the commands with only 1GB free memory (for example)." + "Note that we're free to write the output format as any format supported by `SeqIO.write` so long as the information is adequate. In this case, reading the `my_sequences.fa` and writing it back to `parse.fastq` would not be possible since we have discarded the quality information.\n", + "\n", + "Additionally, the sequence records are written one-by-one to the file (courtesy of `SeqIO.parse`). So even if the `data/parse.fastq` is 10GB large, we can run the commands with only 1GB of free memory (for example)." ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "# Additional `SeqIO` methods\n", + "### Additional `SeqIO` methods\n", "\n", "There are several more useful `SeqIO` functions, which you are free to try out on your own:\n", "\n", - "* `SeqIO.index`: for efficiently fetching random records from a large sequence file\n", - "* `SeqIO.index_db`: similar to `SeqIO.index`, but with a persistent index\n", - "* `SeqIO.convert`: shortcut for converting between file formats" + "* `SeqIO.index`: For efficiently fetching random records from a large sequence file.\n", + "* `SeqIO.index_db`: Similar to `SeqIO.index`, but with a persistent index.\n", + "* `SeqIO.convert`: Shortcut for converting between file formats." ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "# Fetching from online resources: Bio.Entrez\n", + "<a id=\"entrez\"></a>\n", + "## Fetching from online resources: NCBI's Entrez\n", "\n", - "The `Bio.Entrez` library provides interface to [NCBI's Entrez e-utilities](https://www.ncbi.nlm.nih.gov/books/NBK25500/). One example we are demonstrating today is the `Entrez.efetch` utility to retrieve various records from one of NCBI's database." + "The `Bio.Entrez` library provides interface to [NCBI's Entrez e-utilities](https://www.ncbi.nlm.nih.gov/books/NBK25500/). One example we are demonstrating today is the `Entrez.efetch` utility to retrieve various records from one of NCBI's databases." ] }, { @@ -1037,11 +1062,18 @@ "outputs": [], "prompt_number": 171 }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "To monitor potential excessive use of their services, NCBI requests you to specify your email address with each request. With Biopython, you can set it once for your session like this:" + ] + }, { "cell_type": "code", "collapsed": false, "input": [ - "Entrez.email = 'python@lumc.nl' # this is an NCBI requirement. if not provided, efetch will not work" + "Entrez.email = 'python@lumc.nl'" ], "language": "python", "metadata": {}, @@ -1052,14 +1084,16 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "The `Entrez.efetch` function returns a file-like handle that instead of pointing to a local file, points to a remote resource. This file handle is similar to the local file handle we saw on Tuesday as well." + "### Fetching with `efetch`\n", + "\n", + "The `Entrez.efetch` function returns a file-like handle that instead of pointing to a local file, points to a remote resource. This file handle is similar to the local file handle we saw on Tuesday." ] }, { "cell_type": "code", "collapsed": false, "input": [ - "fetched = Entrez.efetch(db=\"nucleotide\", id=\"NM_005804\", rettype=\"gb\", retmode=\"text\")" + "efetch_handle = Entrez.efetch(db=\"nucleotide\", id=\"NM_005804\", rettype=\"gb\", retmode=\"text\")" ], "language": "python", "metadata": {}, @@ -1070,14 +1104,14 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "We can of course do a `fetched.read()` and see the entire contents of the genbank file. But we know how to work with `SeqIO.read` now, so let's use that instead (recall that `SeqIO.read` works equally well with file handles and local file names):" + "We can of course do an `efetch_handle.read()` and see the entire contents of the genbank file. But we know how to work with `SeqIO.read` now, so let's use that instead (recall that `SeqIO.read` works equally well with file handles and local file names)." ] }, { "cell_type": "code", "collapsed": false, "input": [ - "ncbi_rec = SeqIO.read(fetched, 'genbank')" + "ncbi_record = SeqIO.read(efetch_handle, 'genbank')" ], "language": "python", "metadata": {}, @@ -1088,7 +1122,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "print ncbi_rec" + "print ncbi_record" ], "language": "python", "metadata": {}, @@ -1155,7 +1189,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "fetched2 = Entrez.efetch(db=\"nucleotide\", id=[\"NM_005804\",\"NM_000967\"], rettype=\"gb\", retmode=\"text\")" + "efetch_handle = Entrez.efetch(db=\"nucleotide\", id=[\"NM_005804\",\"NM_000967\"], rettype=\"gb\", retmode=\"text\")" ], "language": "python", "metadata": {}, @@ -1166,8 +1200,8 @@ "cell_type": "code", "collapsed": false, "input": [ - "for rec in SeqIO.parse(fetched2, 'genbank'):\n", - " print rec.id, rec.description" + "for record in SeqIO.parse(efetch_handle, 'genbank'):\n", + " print record.id, record.description" ], "language": "python", "metadata": {}, @@ -1194,27 +1228,32 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "## Other `Bio.Entrez` utilities\n", + "### Other `Bio.Entrez` utilities\n", "\n", - "Biopython has the entire Entrez suite supported. A complete list of the Entrez services are available in its [documentation](https://www.ncbi.nlm.nih.gov/books/NBK25500/)." + "Biopython has the entire Entrez suite supported. A complete list of the Entrez services is available in its [documentation](https://www.ncbi.nlm.nih.gov/books/NBK25500/)." ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "# Performing remote search: `Bio.Blast.NCBIWWW`\n", + "<a id=\"blast\"><a/>\n", + "## Performing a remote BLAST search\n", "\n", - "Entrez is not the only online service Biopython interacts with. We can also submit BLAST searches through Biopython to NCBI using the `qblast` function in the `NCBIWWW` module.\n", - "\n", - "Similar to Entrez, Biopython tries to conform to the NCBI's remote BLAST required parameters in the function call. The official NCBI documentation is [here](https://www.ncbi.nlm.nih.gov/BLAST/Doc/urlapi.html)." + "A common action for bioinformaticians is to perform a BLAST search. Biopython provides a way to automate the search and helps you interpret the results." ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "Let's do a short BLAST search using our earlier fetched `ncbi_seq` (NM_005804). " + "### Using NCBI's BLAST\n", + "\n", + "Entrez is not the only online service Biopython interacts with. We can also submit BLAST searches to NCBI using the `qblast` function in the `Bio.Blast.NCBIWWW` module.\n", + "\n", + "Similar to Entrez, Biopython tries to conform to the NCBI's remote BLAST required parameters in the function call. The official NCBI documentation is [here](https://www.ncbi.nlm.nih.gov/BLAST/Doc/urlapi.html).\n", + "\n", + "Let's do a short BLAST search using our earlier fetched `ncbi_record` (NM_005804). " ] }, { @@ -1232,7 +1271,7 @@ "cell_type": "code", "collapsed": false, "input": [ - "blast_handle = qblast('blastn', 'refseq_mrna', ncbi_rec.seq)" + "blast_handle = qblast('blastn', 'refseq_mrna', ncbi_record.seq)" ], "language": "python", "metadata": {}, @@ -1243,7 +1282,7 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "By default, the command returns the BLAST result in an XML file (one of the available formats to download from an interactive BLAST session). We can do the following to write the results to a file for viewing later:\n", + "By default, the command returns the BLAST result in an XML file (one of the available formats to download from an interactive BLAST session). We will use `blast_handle` in the next section, but of course we could also write the results to a file for viewing later:\n", "\n", " blast_file = open('my_blast_output.xml', 'w')\n", " blast_file.write(blast_handle.read())\n", @@ -1254,21 +1293,11 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "# Parsing the search results: `Bio.SearchIO`" - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "Of course, Biopython has parsing capabilities for the results as well. As mentioned briefly above, parsing for these types of file is available in the `Bio.Blast.NCBIXML` submodule and `Bio.SearchIO` submodule. The former is an old module that will be deprecated soon, replaced by the latter (which is still in experimental stage, but already stable enough)." - ] - }, - { - "cell_type": "markdown", - "metadata": {}, - "source": [ - "Here's a short example if we're using `Bio.SearchIO`:" + "### Parsing the BLAST search results\n", + "\n", + "Of course, Biopython has parsing capabilities for the results as well. As mentioned briefly above, parsing for these types of file is available in the `Bio.Blast.NCBIXML` submodule and `Bio.SearchIO` submodule. The former is an old module that will be deprecated soon and replaced by the latter (which is still in experimental stage, but already stable enough).\n", + "\n", + "Here's a short example using `Bio.SearchIO`:" ] }, { @@ -1376,13 +1405,13 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "Notice that the function call is very similar to `SeqIO`. However, the returned object `QueryResult` is something we have not seen before. In general, this is a container object for all our results.\n", + "Notice that the function call is very similar to `SeqIO`. However, the returned `QueryResult` object is something we have not seen before. In general, this is a container object for all our results.\n", "\n", "The main principle of `Bio.SearchIO` objects is that for all sequence database searches, we have at least three layers of containers:\n", "\n", - " 1. The query itself (`QueryResult`)\n", - " 2. All the database hits from the query (`Hit`)\n", - " 3. All the locations in a database record where alignments are found (`HSP`, for high-scoring pair)" + "1. The query itself (`QueryResult`).\n", + "2. All the database hits from the query (`Hit`).\n", + "3. All the locations in a database record where alignments are found (`HSP`, for high-scoring pair)." ] }, { @@ -1422,7 +1451,7 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "And all these containers are indexable" + "And all these containers are indexable." ] }, { @@ -1499,24 +1528,27 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "# Closing\n", - "\n", - "Biopython is not the only useful 3rd party Python library out there. There is still much ground it does not cover, which is covered by other modules. Some of the modules you may find useful:\n", + "### <span class=\"exercise\">Exercise: Navigating through a BLAST result</span>\n", "\n", - "* [pysam](http://wwwfgu.anat.ox.ac.uk/~andreas/documentation/samtools/api.html): for parsing and writing SAM/BAM files\n", - "* [PyVCF](http://pyvcf.readthedocs.org/en/latest/): for working with VCF files\n", - "* [track](http://xapple.github.io/track/): for working with genome tracks (e.g. BED tracks)\n", - "* ..." + "From the last BLAST result we have, fetch the full sequences of the top 10 hits that are not predicted sequences." ] }, { "cell_type": "markdown", "metadata": {}, "source": [ - "$\\S$ Exercise: Navigating through a BLAST result\n", - "===\n", + "<a id=\"beyond\"></a>\n", + "## Beyond Biopython\n", + "\n", + "Biopython is not the only useful 3rd party Python library out there. There is still much ground it does not cover, which is covered by other modules. Some of the modules you may find useful:\n", "\n", - "* From the last BLAST result we have, fetch the full sequences of the top 10 hits that are not predicted sequences." + "- [pysam](http://wwwfgu.anat.ox.ac.uk/~andreas/documentation/samtools/api.html): A samtools wrapper for parsing and writing SAM/BAM alignment files.\n", + "- [PyVCF](http://pyvcf.readthedocs.org/en/latest/): For working with VCF files.\n", + "- [track](http://xapple.github.io/track/): For working with genome tracks (e.g. BED tracks).\n", + "- [pybedtools](http://pythonhosted.org/pybedtools/): A bedtools wrapper for working with genome tracks.\n", + "- [metaseq](http://pythonhosted.org/metaseq/): A framework for exploring genomic data.\n", + "- [GEMINI](http://gemini.readthedocs.org/): A flexible framework for exploring genome variation.\n", + "- ..." ] }, { @@ -1525,7 +1557,7 @@ "input": [ "from IPython.core.display import HTML\n", "def custom_style():\n", - " style = open('styles/notebook.css.small', 'r').read()\n", + " style = open('styles/notebook.css', 'r').read()\n", " return HTML('<style>' + style + '</style>')\n", "def custom_script():\n", " script = open('styles/notebook.js', 'r').read()\n", @@ -1534,7 +1566,7 @@ "language": "python", "metadata": {}, "outputs": [], - "prompt_number": 133 + "prompt_number": 9 }, { "cell_type": "code", @@ -1555,8 +1587,8 @@ " src: url('http://mirrors.ctan.org/fonts/cm-unicode/fonts/otf/cmunss.otf');\n", "}\n", "div.cell{\n", - " /*width:800px;\n", - " margin-left:16% !important;*/\n", + " width:800px;\n", + " margin-left:16% !important;\n", " margin-right:auto;\n", "}\n", "h1 {\n", @@ -1570,7 +1602,7 @@ " font-family: Computer Modern, \"Helvetica Neue\", Arial, Helvetica, Geneva, sans-serif;\n", " line-height: 145%;\n", " font-size: 130%;\n", - " /*width:800px;*/\n", + " width:800px;\n", " margin-left:auto;\n", " margin-right:auto;\n", "}\n", @@ -1580,14 +1612,14 @@ ".prompt{\n", " display: None;\n", "}\n", - ".text_cell_render h5 {\n", + ".text_cell_render .exercise {\n", " font-weight: 300;\n", - " font-size: 22pt;\n", + " /*font-size: 22pt;*/\n", " color: #4057A1;\n", " font-style: italic;\n", - " margin-bottom: .5em;\n", + " /*margin-bottom: .5em;\n", " margin-top: 0.5em;\n", - " display: block;\n", + " display: block;*/\n", "}\n", "\n", ".warning{\n", @@ -1597,23 +1629,50 @@ ], "metadata": {}, "output_type": "pyout", - "prompt_number": 75, + "prompt_number": 10, "text": [ - "<IPython.core.display.HTML at 0x418a4d0>" + "<IPython.core.display.HTML at 0x360b410>" ] } ], - "prompt_number": 75 + "prompt_number": 10 }, { "cell_type": "code", "collapsed": false, "input": [ - "custom_script()\n" + "custom_script()" ], "language": "python", "metadata": {}, - "outputs": [] + "outputs": [ + { + "html": [ + "<script>// https://github.com/CamDavidsonPilon/Probabilistic-Programming-and-Bayesian-Methods-for-Hackers\n", + "MathJax.Hub.Config({\n", + " TeX: {\n", + " extensions: [\"AMSmath.js\"]\n", + " },\n", + " tex2jax: {\n", + " inlineMath: [ ['$','$'], [\"\\\\(\",\"\\\\)\"] ],\n", + " displayMath: [ ['$$','$$'], [\"\\\\[\",\"\\\\]\"] ]\n", + " },\n", + " displayAlign: 'center', // Change this to 'center' to center equations.\n", + " \"HTML-CSS\": {\n", + " styles: {'.MathJax_Display': {\"margin\": 4}}\n", + " }\n", + " });\n", + "</script>" + ], + "metadata": {}, + "output_type": "pyout", + "prompt_number": 8, + "text": [ + "<IPython.core.display.HTML at 0x351cc10>" + ] + } + ], + "prompt_number": 8 } ], "metadata": {} diff --git a/data/my_blast_output.xml b/data/my_blast_output.xml new file mode 100644 index 0000000..2c2a0d1 --- /dev/null +++ b/data/my_blast_output.xml @@ -0,0 +1,1557 @@ +<?xml version="1.0"?> +<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> +<BlastOutput> + <BlastOutput_program>blastn</BlastOutput_program> + <BlastOutput_version>BLASTN 2.2.28+</BlastOutput_version> + <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> + <BlastOutput_db>refseq_mrna</BlastOutput_db> + <BlastOutput_query-ID>43607</BlastOutput_query-ID> + <BlastOutput_query-def>No definition line</BlastOutput_query-def> + <BlastOutput_query-len>1558</BlastOutput_query-len> + <BlastOutput_param> + <Parameters> + <Parameters_expect>10</Parameters_expect> + <Parameters_sc-match>2</Parameters_sc-match> + <Parameters_sc-mismatch>-3</Parameters_sc-mismatch> + <Parameters_gap-open>5</Parameters_gap-open> + <Parameters_gap-extend>2</Parameters_gap-extend> + <Parameters_filter>L;m;</Parameters_filter> + </Parameters> + </BlastOutput_param> +<BlastOutput_iterations> +<Iteration> + <Iteration_iter-num>1</Iteration_iter-num> + <Iteration_query-ID>43607</Iteration_query-ID> + <Iteration_query-def>No definition line</Iteration_query-def> + <Iteration_query-len>1558</Iteration_query-len> +<Iteration_hits> +<Hit> + <Hit_num>1</Hit_num> + <Hit_id>gi|308522777|ref|NM_005804.3|</Hit_id> + <Hit_def>Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), transcript variant 1, mRNA</Hit_def> + <Hit_accession>NM_005804</Hit_accession> + <Hit_len>1558</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>2810.93</Hsp_bit-score> + <Hsp_score>3116</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>1558</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1558</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1558</Hsp_identity> + <Hsp_positive>1558</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1558</Hsp_align-len> + <Hsp_qseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCTAAAAAAAAAAAAAAAAAAA</Hsp_qseq> + <Hsp_hseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCTAAAAAAAAAAAAAAAAAAA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>2</Hit_num> + <Hit_id>gi|397471065|ref|XM_003807080.1|</Hit_id> + <Hit_def>PREDICTED: Pan paniscus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_003807080</Hit_accession> + <Hit_len>1687</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>2727.98</Hsp_bit-score> + <Hsp_score>3024</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>1540</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1540</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1529</Hsp_identity> + <Hsp_positive>1529</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1540</Hsp_align-len> + <Hsp_qseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCTA</Hsp_qseq> + <Hsp_hseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCGGCAGCTCGAGTCTGAGCGCCCGGCGGAAAACCGAAGTCAGAAGTCTCTCTTAGCAGCACGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTATGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCGGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCAGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATTGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCTA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>3</Hit_num> + <Hit_id>gi|426387514|ref|XM_004060164.1|</Hit_id> + <Hit_def>PREDICTED: Gorilla gorilla gorilla DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A, transcript variant 1 (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_004060164</Hit_accession> + <Hit_len>1687</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>2695.52</Hsp_bit-score> + <Hsp_score>2988</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>1539</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1539</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1521</Hsp_identity> + <Hsp_positive>1521</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1539</Hsp_align-len> + <Hsp_qseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCT</Hsp_qseq> + <Hsp_hseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCGGCAGCTCGTGTCTGAGCGCCCGGCGGAATACCGAAGTCAGAAGGCTCTGTTAGCAGCACGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCGGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACAGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGATGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCCTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGAGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTTAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTATCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATTGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCT</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>4</Hit_num> + <Hit_id>gi|395750601|ref|XM_002828787.2|</Hit_id> + <Hit_def>PREDICTED: Pongo abelii DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A, transcript variant 1 (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_002828787</Hit_accession> + <Hit_len>1685</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>2645.02</Hsp_bit-score> + <Hsp_score>2932</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>1536</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1536</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1508</Hsp_identity> + <Hsp_positive>1508</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1536</Hsp_align-len> + <Hsp_qseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCA</Hsp_qseq> + <Hsp_hseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCGGCAGCTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTCAGAAGGCTGTCTTAGCAGCACGCGGAGACGAAAGGGGTGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCGGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCTTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCGTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGAATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACAGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTCTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTTGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCAGGCCGCATCCTGGCGCTTGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCCTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATTGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATTGAGCAGAGCCGGTAACCACCACATGCCAGAGCCGCCCACCCGGAGCCTCCCGCATGCAGCTTCACCTCCCCTTTCCAGGAGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGACTCCCACCCCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| | |||||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>5</Hit_num> + <Hit_id>gi|402904531|ref|XM_003915048.1|</Hit_id> + <Hit_def>PREDICTED: Papio anubis DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_003915048</Hit_accession> + <Hit_len>1975</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>2572.89</Hsp_bit-score> + <Hsp_score>2852</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>2</Hsp_query-from> + <Hsp_query-to>1539</Hsp_query-to> + <Hsp_hit-from>268</Hsp_hit-from> + <Hsp_hit-to>1829</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1505</Hsp_identity> + <Hsp_positive>1505</Hsp_positive> + <Hsp_gaps>24</Hsp_gaps> + <Hsp_align-len>1562</Hsp_align-len> + <Hsp_qseq>GCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTG----------CCAGAGCCGCCCACCCG--------------GAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCT</Hsp_qseq> + <Hsp_hseq>GCAGCAGCCCGACGCAAGAGGCAGGAAGCGCGGCAGCTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTCAGAAGGCTCTCTTAGCAGCACGCGGAGAAGAACGGGGAGCTCGCATCATGGCAGAACAGGATGTGGAAAATGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCGGCCCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCGTCTGAGGTCCAGCACGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAAGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTTAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTCTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGGGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAACAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCCTGGACGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTATGACATGCCTGAGGACTCGGACACTTACTTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATTGACATATCCACATACATTGAGCAGAGCCGGTAACCACCACGTGCCCCGGCAGTCCAGAGCCGCCCACCCGGAGCTGCCCACCCAGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGTGCCACTGTTGAGAAGTTAGAAATTGTGTGAGAATAAACTTGTTATTATGGAAACCTGGCTCCCACACCATCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||||| |||||||||||| ||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>6</Hit_num> + <Hit_id>gi|426387518|ref|XM_004060166.1|</Hit_id> + <Hit_def>PREDICTED: Gorilla gorilla gorilla DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A, transcript variant 3 (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_004060166</Hit_accession> + <Hit_len>1774</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>2535.02</Hsp_bit-score> + <Hsp_score>2810</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>112</Hsp_query-from> + <Hsp_query-to>1539</Hsp_query-to> + <Hsp_hit-from>199</Hsp_hit-from> + <Hsp_hit-to>1626</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1419</Hsp_identity> + <Hsp_positive>1419</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1428</Hsp_align-len> + <Hsp_qseq>CAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCT</Hsp_qseq> + <Hsp_hseq>CAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCGGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACAGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGATGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCCTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGAGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTTAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTATCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATTGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>7</Hit_num> + <Hit_id>gi|403302190|ref|XM_003941697.1|</Hit_id> + <Hit_def>PREDICTED: Saimiri boliviensis boliviensis DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A, transcript variant 1 (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_003941697</Hit_accession> + <Hit_len>1684</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>2327.63</Hsp_bit-score> + <Hsp_score>2580</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>1539</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1539</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1442</Hsp_identity> + <Hsp_positive>1442</Hsp_positive> + <Hsp_gaps>14</Hsp_gaps> + <Hsp_align-len>1543</Hsp_align-len> + <Hsp_qseq>AGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTG----------CCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCT</Hsp_qseq> + <Hsp_hseq>AGCCAGACGCAGGAGGCAGGAAGCGCGGCAGCTCGTGCCTGAGCTCCCGGCAGATAACCGAAGTCGGAAGGCTCTCCTAGCAGCACGCG---AAGAACTGCGAGCCAGCAGCATGGCAGAACAGGATGTGGAAAACGAGCTTTTGGATTACGACGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCGCTAAAAAAGACATGAAGGGATCCTATGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCAGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCGTCTGAGGTTCAGCACGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCGAAGTCTGGGATGGGCAAGACCGCAGTCTTCGTGCTAGCCACCCTGCAACAGATCGAGCCCGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTCTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGGGGCCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTTGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTTGTGCGGAACAGAAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGCGACAAAATGCTGGAGCAGCTCGACATGCGGCGGGACGTGCAGGAGATCTTCCGCCTGACGCCGCATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAAGTGTTTGTGGATGATGAGACCAAGCTCACGCTACACGGACTGCAGCAGCACTACGTCAAACTCAGAGACAGCGAGAAGAACCGGAAGCTCTTCGACCTCCTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTAGCCCAGCTCCTCGTGGAACAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAGCGAGTCAACATTGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAACCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAGCTTCCAGAGGAAATTGACATCTCCACATACATTGAGCAGAGCCGGTAACCCCCACGTGCCCTGCCAGTCCAGAGCCGCCAACCTGGAGCCTCCCGCACGCAGCTCCACCACCTCTTTCCAGACGCCCCTGTTCAGAAGCTGTAGATTGTATAAGAATAAACGTG-TATTATGGAAGCCTGGTTCCCACACCATCT</Hsp_hseq> + <Hsp_midline>|||| |||||| |||||||||||||| ||| |||||| |||||| |||||| || ||||||||| ||||| |||| ||||||| |||| |||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||| ||||||||||| |||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| ||| |||||| |||||| |||||| |||| || |||||||| |||| ||||| ||||||| ||||||||| ||||||||| || |||||||||||||||| |||||| ||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>8</Hit_num> + <Hit_id>gi|301601638|ref|NM_001193491.1|</Hit_id> + <Hit_def>Macaca mulatta DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>NM_001193491</Hit_accession> + <Hit_len>1300</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>2259.1</Hsp_bit-score> + <Hsp_score>2504</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>115</Hsp_query-from> + <Hsp_query-to>1414</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1300</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1281</Hsp_identity> + <Hsp_positive>1281</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1300</Hsp_align-len> + <Hsp_qseq>CATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCC</Hsp_qseq> + <Hsp_hseq>CATCATGGCAGAACAGGATGTGGAAAATGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCGGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCGTCTGAGGTCCAGCACGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAAGCCAAGTCTGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTTAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAGTATGAGCGCTTCTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGGGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAACAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCCTGGACGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTATGACATGCCTGAGGACTCGGACACTTACTTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATTGACATATCCACATACATTGAGCAGAGCCGGTAACCACCACGTGCC</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>9</Hit_num> + <Hit_id>gi|441628855|ref|XM_003275677.2|</Hit_id> + <Hit_def>PREDICTED: Nomascus leucogenys DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_003275677</Hit_accession> + <Hit_len>1783</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>2212.22</Hsp_bit-score> + <Hsp_score>2452</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>112</Hsp_query-from> + <Hsp_query-to>1539</Hsp_query-to> + <Hsp_hit-from>220</Hsp_hit-from> + <Hsp_hit-to>1638</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1345</Hsp_identity> + <Hsp_positive>1345</Hsp_positive> + <Hsp_gaps>13</Hsp_gaps> + <Hsp_align-len>1430</Hsp_align-len> + <Hsp_qseq>CAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGG--TGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCT</Hsp_qseq> + <Hsp_hseq>CAGCGTCATGGCAGAACAGGATGTGGAAAATGATCTTTTGGATTATGATGAAGAAGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCGGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGTTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCGTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCGATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGTATGGGCAAGACGGCGGTCTTCGTGTTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACAAGGGAGCTGGCCTTCCAGATCAGCAAAGAATATGAGCGCTTCTCCAAGTACATGCCCAGCGTCAAGGT----GAGCCCCTCGGGCTGGACTGGACC------AGG-TGCCGCTTGGTTTCTGCAGCTTTGTTANNNNNNNNNNNNNNNNNNNNNNNNCCGCATCCTGGCACTCGTGCGAAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCCTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTTAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATTGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATAGACATCTCCACATACATTGAGCAGAGCCGGTAACCACCATGTGCCAGAGCCGCCCACCTGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTCGCTCCCACCCCATCT</Hsp_hseq> + <Hsp_midline>|||| ||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | | | |||| ||| || | ||| || | ||| | || ||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>10</Hit_num> + <Hit_id>gi|478537026|ref|XM_004442573.1|</Hit_id> + <Hit_def>PREDICTED: Ceratotherium simum simum DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_004442573</Hit_accession> + <Hit_len>1548</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1921.87</Hsp_bit-score> + <Hsp_score>2130</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>1404</Hsp_query-to> + <Hsp_hit-from>18</Hsp_hit-from> + <Hsp_hit-to>1419</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1270</Hsp_identity> + <Hsp_positive>1270</Hsp_positive> + <Hsp_gaps>2</Hsp_gaps> + <Hsp_align-len>1404</Hsp_align-len> + <Hsp_qseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACC</Hsp_qseq> + <Hsp_hseq>AGCCGCAGTCGGACGCCAG-GGCCGGAAGCGCGGCAGCTTGGGTCGAAGCGCGCGACCGGTAACTGGAGCCGGCGGC-TGTCCTCGCAGCACGCGGAGGCGAACGGGGAACCAGCACCATGGCCGAACAGGACGTGGAGAACGAGCTTCTGGATTACGAGGAAGATGAAGAGCCCCAGGCTCCTCCCGAGAGCTCACCAGCTCCCCCCAAGAAAGACGTCAAGGGTTCCTACGTTTCCATCCACAGTTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTGCTGCGGGCCATAGTGGACTGTGGCTTTGAGCATCCGTCTGAGGTCCAGCACGAGTGCATTCCCCAAGCGATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCTGGGATGGGTAAGACGGCGGTCTTCGTGCTGGCCACCCTGCAGCAGATTGAGCCCGTCAACGGACAGGTGACGGTCCTCGTCATGTGCCACACTCGGGAGCTGGCCTTCCAGATCAGCAAGGAGTACGAGCGCTTCTCCAAGTACATGCCCAGCGTCAAGGTGTCCGTGTTCTTCGGGGGCCTCTCCATCAAGAAGGACGAAGACGTGTTGAAGAAGAGCTGTCCCCACGTGGTAGTGGGGACACCAGGCCGGATCCTGGCGCTTGTGCGCAACAGGAGCCTCAACCTGAGGAACGTGAAGCACTTCGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGCCTGACGCCCCACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGAGATCCGGCCCGTCTGCAGGAAGTTCATGCAAGACCCCATGGAGGTGTTTGTGGACGACGAGACGAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTGAAGCTCAAGGACAGCGAGAAGAACCGCAAGCTCTTCGACCTCCTGGACGTGCTGGAGTTTAACCAGGTGGTGATCTTTGTGAAGTCCGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACAGGGGTATGGCCCAGGAGGAGCGCCTCTCACGCTACCAGCAGTTCAAGGACTTCCAGCGGCGGATCCTGGTGGCTACCAACCTGTTTGGCCGAGGGATGGACATCGAGCGCGTTAACATCGTCTTCAACTACGACATGCCCGAGGACTCCGACACCTATCTCCACCGGGTGGCCCGTGCGGGTCGCTTTGGCACCAAAGGCCTGGCCATCACTTTCGTGTCTGACGAGAACGATGCCAGAATCCTCAATGACGTCCAGGACCGGTTTGAAGTGAACGTGGCGGAGCTTCCGGAAGAAATCGACATCTCCACGTACATCGAGCAGAGCCGGTAACC</Hsp_hseq> + <Hsp_midline>||| |||| | ||||| || ||| |||||||| ||| || | ||| ||||| || | | ||| | || || | | || | ||||| ||||||| ||||||||| |||||| |||||| |||||||| ||||| ||||| ||| |||||||||| ||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||||||||||||| ||||||||| || || |||||||| || ||||| ||||||||||| ||||| || |||||| ||| ||| | ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||||| || ||| |||| ||||||||||||||||||||| | ||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||| |||||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| || ||||| || ||||| || ||||||||||||||||| |||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>11</Hit_num> + <Hit_id>gi|472358840|ref|XM_004398985.1|</Hit_id> + <Hit_def>PREDICTED: Odobenus rosmarus divergens DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_004398985</Hit_accession> + <Hit_len>1549</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1882.2</Hsp_bit-score> + <Hsp_score>2086</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>12</Hsp_hit-from> + <Hsp_hit-to>1417</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1263</Hsp_identity> + <Hsp_positive>1263</Hsp_positive> + <Hsp_gaps>2</Hsp_gaps> + <Hsp_align-len>1407</Hsp_align-len> + <Hsp_qseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAG-CGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>AGCCGCAGTCCGACGTAGGAGGCAGGAAGCGCTGCAGCTCTTGT-TGAGGCGCGCGACCGGTAACCAGAGTCGGACGGAGCACCTCGCAGCACGCGGCGGCGAACGGGGAACCAGCACCATGGCGGAACAGGATGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTCCAGAGAGCACTCCTGCTCCCCCCAAGAAAGACGTCAAGGGTTCCTATGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTAAAGCCAGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTTGAGCATCCATCTGAGGTCCAGCACGAGTGTATTCCCCAAGCCATCCTGGGCATGGATGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACGGCAGTCTTCGTGCTGGCTACCCTGCAGCAGATCGAGCCAGTCAACGGACAGGTGACAGTCCTGGTCATGTGCCATACGCGGGAGCTCGCCTTCCAGATCAGCAAAGAGTACGAACGCTTCTCCAAGTACATGCCCAGTGTCAAGGTGTCCGTGTTCTTTGGGGGCCTTTCCATCAAGAAAGATGAAGAGGTATTGAAGAAGAACTGTCCCCATGTCGTAGTGGGGACACCAGGGCGGATCCTGGCACTAGTGCGGAACAGGAGCCTGAACCTGAAGAACGTGAAGCACTTCGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGTCTGACACCCCATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGAGATCAGGCCTGTCTGCAGGAAGTTCATGCAAGACCCCATGGAGGTGTTTGTAGACGATGAGACCAAGCTCACACTGCACGGACTGCAACAGTACTACGTCAAGCTTAAGGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGTTGGAGTTTAACCAGGTGGTGATCTTCGTGAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCTATCCACAGGGGCATGGCCCAGGAGGAGCGTCTGTCACGTTATCAGCAGTTTAAAGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAGCGAGTCAACATCGTCTTCAACTATGACATGCCCGAGGACTCGGACACCTACCTCCACCGAGTGGCCCGTGCAGGTCGCTTTGGGACCAAAGGTCTGGCTATCACTTTTGTATCTGACGAGAACGATGCCAAAATCCTCAATGACGTTCAGGACAGGTTTGAAGTGAACGTGGCAGAACTTCCTGAAGAAATCGACATTTCCACGTATATTGAGCAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>||| |||| |||||| | |||||||||||||| ||| ||| ||| |||| ||| || | | |||| ||| ||| | | | | ||||| ||||| | ||||||||| |||||| |||||| ||||||||||||||||| || ||| ||||||| || ||||| ||||||||||||||||||| ||||||||| || |||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| || |||||||||||||| ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||| || || || ||||| ||||||||||||||||| ||||||||||| |||||||| || || || ||||||||||| |||||||| || |||||||||||||||||||||||||| |||||||| || || || |||||||| || |||||||| |||||| | | ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||| |||||||| ||||| |||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||| ||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||||| || |||||||||||||| || ||||||||||| ||||| || || |||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>12</Hit_num> + <Hit_id>gi|410950597|ref|XM_003981942.1|</Hit_id> + <Hit_def>PREDICTED: Felis catus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_003981942</Hit_accession> + <Hit_len>1461</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1876.79</Hsp_bit-score> + <Hsp_score>2080</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>87</Hsp_query-from> + <Hsp_query-to>1471</Hsp_query-to> + <Hsp_hit-from>14</Hsp_hit-from> + <Hsp_hit-to>1397</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1251</Hsp_identity> + <Hsp_positive>1251</Hsp_positive> + <Hsp_gaps>11</Hsp_gaps> + <Hsp_align-len>1390</Hsp_align-len> + <Hsp_qseq>CAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC-CACGT----GCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCA</Hsp_qseq> + <Hsp_hseq>CAGCGCGCGGAGGCGAACGGGGAACCAGCGCCATGGCGGAACAGGATGTGGAAAATGAGCTTCTGGATTACGAGGAAGATGAAGAGCCCCAGGCTCCTCCGGAGAGCACTCCTGCTCCCCCCAAGAAAGACGTCAAGGGTTCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTTTGCTGAAGCCGGAGCTTCTTAGGGCCATCGTGGACTGTGGCTTTGAGCATCCATCTGAGGTCCAGCACGAGTGTATTCCCCAAGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACGGCCGTCTTCGTGCTGGCCACCCTGCAGCAGATTGAGCCTGTCAACGGACAGGTGACAGTGCTGGTCATGTGTCATACTCGGGAGCTGGCATTCCAGATTAGCAAGGAATATGAACGCTTCTCCAAATACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGGGGCCTTTCCATCAAGAAGGATGAAGAGGTATTGAAGAAGAACTGTCCGCACGTCGTGGTGGGGACACCAGGCCGGATCCTGGCACTCGTACGGAACAGGAGCCTCAACCTGAAGAACGTGAAGCACTTCGTGCTGGACGAGTGCGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGCCTGACGCCCCACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGAGATCAGGCCCGTGTGCAGGAAGTTCATGCAAGACCCCATGGAGGTGTTTGTAGACGATGAGACCAAGCTCACGCTACACGGACTCCAGCAGTACTACGTCAAGCTCAAGGACAGCGAGAAGAACCGCAAGCTGTTTGATCTCTTGGACGTGCTGGAGTTTAACCAGGTGGTGATCTTCGTGAAGTCGGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTTGTGGAGCAGAACTTCCCGGCCATCGCTATCCACAGGGGCATGGCGCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAAGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGTCGAGGGATGGACATTGAGCGAGTCAACATCGTCTTCAACTATGACATGCCCGAGGACTCGGACACCTACCTCCACCGAGTGGCCCGTGCGGGACGTTTTGGGACCAAAGGTCTGGCCATCACTTTTGTGTCCGATGAGAATGATGCCAAAATCCTCAATGACGTTCAGGACAGGTTTGAAGTGAACGTGGCAGAACTTCCTGAAGAAATTGACATCTCTACATACATTGAGCAGAGCCGGTAACCACACGCCTGGTGGCCAGAGTCGCCC------TGTCTCCTGAGTGCTGCTTCAAGTCCTCTTTCTAGGCACCA</Hsp_hseq> + <Hsp_midline>|||||||||||| ||||||||| ||||| |||||| ||||||||||||||||| || ||| |||||||||| ||||| ||||||||||||||||||| |||||||| || |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| || || |||||||||| |||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| || ||||||||||||||||| || |||||||||||||| || ||||| |||||||| ||||| ||||| |||||| ||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||| ||||| || ||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||| |||||||| ||||| || ||||| |||||||| || ||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||||||| || ||||| |||||||| |||||||| ||||||||||||||||||| | | | ||||||| ||||| | | || | ||| |||||| ||| ||||| |||| |||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>13</Hit_num> + <Hit_id>gi|395850754|ref|XM_003797893.1|</Hit_id> + <Hit_def>PREDICTED: Otolemur garnettii DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_003797893</Hit_accession> + <Hit_len>1318</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1876.79</Hsp_bit-score> + <Hsp_score>2080</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>113</Hsp_query-from> + <Hsp_query-to>1402</Hsp_query-to> + <Hsp_hit-from>29</Hsp_hit-from> + <Hsp_hit-to>1318</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1190</Hsp_identity> + <Hsp_positive>1190</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1290</Hsp_align-len> + <Hsp_qseq>AGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAA</Hsp_qseq> + <Hsp_hseq>AGCATCATGGCAGAGCAGGATGTAGAAAATGAACTTTTGGATTATGAGGAAGATGAAGAACCCCAGGCTCCTCCGGAGAGCACTCCAGCTCCCCCTAAAAAAGACGTCAAGGGATCCTACGTTTCCATCCATAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCAGAGCTCCTGAGGGCCATTGTGGACTGTGGCTTTGAGCATCCATCAGAGGTCCAACACGAGTGCATTCCACAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGAATGGGCAAGACAGCAGTTTTTGTGCTGGCCACCCTGCAGCAGATCGAGCCTGTCAACGGACAGGTGACAGTCTTGGTCATGTGCCATACAAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCTAAGTACATGCCCAGTGTCAAGGTGTCTGTCTTCTTCGGTGGCCTCTCCATCAAGAAAGATGAAGAAGTATTGAAGAAAAACTGTCCCCATGTTGTGGTGGGGACCCCAGGCCGGATCTTGGCCCTTGTGCGGAACAGGAGCCTCAACCTGAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAACAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACGCCCCATGAGAAGCAGTGCATGATGTTCAGTGCCACCCTGAGCAAAGAGATCCGCCCTGTCTGCAGGAAGTTCATGCAGGATCCAATGGAGGTGTTTGTGGATGACGAGACCAAGCTCACACTGCATGGGCTACAGCAGTACTATGTCAAGCTCAAGGATAGCGAGAAGAACCGCAAACTCTTTGATCTCTTGGATGTGCTAGAGTTTAACCAGGTGGTCATCTTTGTCAAGTCTGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTAGAACAGAACTTCCCAGCCATTGCCATCCACCGGGGTATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGATATTGAGCGAGTCAACATCGTCTTCAATTATGACATGCCTGAGGACTCTGACACCTACCTCCACCGGGTGGCCAGGGCGGGTCGCTTCGGCACCAAAGGCCTGGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGATGTTCAGGACCGGTTTGAGGTGAATGTGGCAGAACTTCCAGAGGAAATTGATATCTCCACATACATTGAACAGAGCCGGTAA</Hsp_hseq> + <Hsp_midline>|||||||||||||| |||||||| ||||| || ||||||||||| || ||||| ||||| ||||||||||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| || |||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || || |||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||| ||| |||| || |||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| || || ||||||||||| ||||| ||||| || || |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| | ||||| |||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| || || ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| || |||||||||||||||||||||||||| || |||||||||||||| || ||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>14</Hit_num> + <Hit_id>gi|511847827|ref|XM_004748233.1|</Hit_id> + <Hit_def>PREDICTED: Mustela putorius furo DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), transcript variant X3, mRNA >gi|512013622|ref|XM_004824105.1| PREDICTED: Mustela putorius furo DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), transcript variant X3, mRNA</Hit_def> + <Hit_accession>XM_004748233</Hit_accession> + <Hit_len>1505</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1873.18</Hsp_bit-score> + <Hsp_score>2076</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>17</Hsp_hit-from> + <Hsp_hit-to>1422</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1259</Hsp_identity> + <Hsp_positive>1259</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1406</Hsp_align-len> + <Hsp_qseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>AGCCGCAGTCGGACGTAAGAGGCAGGAAGCCCTACAGCTCGTGCTGGGGCGCGAGACGGGTAACCGGAGTCGGACGGCACTTCTCGGAGCACGCGGAGGCGAACGGGGTGCCAGCAGCATGGCGGAACAGGATGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTCCGGAGAGCACTCCTGCTCCCCCCAAGAAAGACGTCAAGGGTTCCTATGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCAGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTCGAGCATCCATCCGAGGTCCAGCACGAGTGTATTCCGCAAGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACGGCGGTCTTCGTGTTGGCCACCCTGCAGCAGATTGAGCCAGTCAGCGGACAGGTTTCAGTCCTGGTCATGTGCCACACGCGGGAGCTCGCCTTCCAGATCAGCAAAGAGTATGAACGCTTCTCCAAGTACATGCCCAGTGTCAAGGTGTCTGTGTTCTTCGGGGGCCTTTCCATCAAGAAGGATGAAGAAATACTGAAGAAGAACTGTCCCCATGTCGTAGTGGGGACACCAGGCCGAATCCTGGCACTAGTGCGGAACAGGAGCCTGAACCTGAAGAACGTGAAACACTTCGTGCTGGACGAGTGTGACAAGATGCTGGAGCAACTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGGCTGACGCCTCACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGAGATCAGGCCTGTCTGCAGGAAGTTCATGCAAGACCCCATGGAGGTGTTTGTGGATGATGAGACCAAGCTCACGCTACACGGACTGCAGCAGTACTATGTCAAGCTCAAGGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGTTGGAGTTTAACCAGGTGGTGATCTTCGTGAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTTGTGGAACAGAACTTCCCGGCCATCGCTATCCACAGGGGCATGGCCCAGGAGGAGCGTCTGTCGCGCTATCAGCAGTTCAAAGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAGCGAGTCAACATCGTCTTCAACTACGACATGCCCGAGGACTCAGACACCTACCTCCACCGAGTGGCCCGTGCAGGTCGCTTTGGGACCAAAGGTCTGGCTATCACTTTTGTATCTGATGAGAATGATGCCAAAATCCTCAATGACGTTCAGGACAGGTTTGAGGTGAACGTGGCCGAACTTCCTGAAGAAATCGACATCTCCACATATATTGAGCAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>||| |||| | |||| |||||||||||||| | || |||||| | |||| | ||| ||||| ||| ||| | || | | ||| ||||||| |||||||| ||||||| |||||| ||||||||||||||||| || ||| ||||||| || ||||| ||||||||||||||||||| |||||||| || |||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| || ||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||| |||| ||||||||| | ||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| || ||||| |||||||| || |||||||| |||||| | | ||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| || ||||||||||| |||||||| || || ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||| || || ||||| |||||||| || |||||||||||||||||||| || |||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>15</Hit_num> + <Hit_id>gi|466046657|ref|XM_004277418.1|</Hit_id> + <Hit_def>PREDICTED: Orcinus orca DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_004277418</Hit_accession> + <Hit_len>1555</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1869.58</Hsp_bit-score> + <Hsp_score>2072</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>1405</Hsp_query-to> + <Hsp_hit-from>19</Hsp_hit-from> + <Hsp_hit-to>1423</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1260</Hsp_identity> + <Hsp_positive>1260</Hsp_positive> + <Hsp_gaps>4</Hsp_gaps> + <Hsp_align-len>1407</Hsp_align-len> + <Hsp_qseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTC--TCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCA</Hsp_qseq> + <Hsp_hseq>AGCCGCAGTCGGACCCACGAGACAGGAAACGCGATAGCTTGTGTCAAGGCGCGCGACCGGTAACAGGAGTCGG--GTGGCGGTCCTCGCAGCACGCGGAGGTGAACGAGGAATCAGCACCATGGCGGAACAGGATGTGGAAAACGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTCCAGAGAGCGCTCCAACTGCTCCCAAGAAAGATGTCAAGGGTTCTTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCTGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTCGAGCATCCATCCGAGGTCCAGCACGAGTGTATTCCACAAGCCATCCTGGGCATGGACATCCTGTGCCAGGCCAAGTCAGGGATGGGCAAGACAGCGGTTTTTGTGTTGGCCACCCTGCAGCAGATTGAGCCCGTCAACGGACAGGTGACGGTCCTGGTTATGTGCCACACTCGAGAGCTGGCCTTCCAGATCAGCAAGGAGTATGAGCGCTTCTCCAAATACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGGGGCCTGTCCATCAAGAAGGACGAGGAGGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACGCCGGGCCGGATCCTGGCGCTTGTGCGGAACAGGAGCCTCAACCTGAAGAATGTGAAGCACTTCGTGTTGGACGAGTGCGACAAGATGCTGGAGCAGTTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGCCTGACACCCCACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGAGATCCGGCCCGTCTGCAGGAAGTTCATGCAAGACCCCATGGAGGTGTTTGTGGACGACGAAACCAAGCTCACGCTGCATGGGCTGCAGCAGTACTACGTCAAACTTAAGGACAGTGAGAAGAACCGCAAGCTCTTTGACCTCCTGGATGTGTTGGAGTTTAACCAGGTGGTGATATTTGTGAAGTCGGTGCAGCGCTGCATGGCCTTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCAGCCATTGCCATCCACAGGGGCATGGCCCAGGAGGAGCGCCTGTCACGTTATCAGCAGTTTAAGGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGAATGGACATTGAGCGTGTCAACATTGTCTTCAATTATGACATGCCCGAGGACTCAGACACCTACCTCCACCGCGTGGCCCGTGCGGGTCGCTTTGGTACCAAAGGCCTGGCCATTACTTTCGTGTCTGATGAGAATGATGCCAAAATCCTCAATGATGTCCAGGACCGGTTTGAAGTGAATGTGGCAGAGCTTCCAGAAGAAATAGACATCTCCACATACATTGAGCAGAGCCGGTAACCA</Hsp_hseq> + <Hsp_midline>||| |||| | ||| || ||| |||||| ||| | || ||||| |||| || | | ||| | ||| || ||| | || | ||||| ||||||| ||||| ||| ||||| |||||| |||||||||||||||||||| ||| ||||||| || ||||| ||||||||||||||||||| ||||||| | ||| || | || |||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| || ||||||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||| |||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||| || || |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||| ||| ||| ||||||||||||||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| | || || || ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| |||||||| ||||| || || |||||||| |||||||| ||||||||||| ||||| |||||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>16</Hit_num> + <Hit_id>gi|470600673|ref|XM_004312273.1|</Hit_id> + <Hit_def>PREDICTED: Tursiops truncatus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_004312273</Hit_accession> + <Hit_len>1555</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1867.77</Hsp_bit-score> + <Hsp_score>2070</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>19</Hsp_hit-from> + <Hsp_hit-to>1424</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1260</Hsp_identity> + <Hsp_positive>1260</Hsp_positive> + <Hsp_gaps>4</Hsp_gaps> + <Hsp_align-len>1408</Hsp_align-len> + <Hsp_qseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTC--TCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>AGCCGCAGTCGGACCCACGAGACAGGAAACGCGATAGCTTGTGTCAAGGCGCGCGACCGGTAACAGGAGTCGG--GTGGCGGTCCTCGCAGCACGCGGTGGTGAACGAGGAATCAGCACCATGGCGGAACAGGATGTGGAAAACGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTCCAGAGAGCGCTCCAACTGCTCCCAAGAAAGATGTCAAGGGTTCTTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCTGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTCGAGCATCCATCCGAGGTCCAGCACGAGTGTATTCCACAAGCCATCCTGGGCATGGACATCCTGTGCCAGGCCAAGTCAGGGATGGGCAAGACAGCGGTTTTTGTGTTGGCCACCCTGCAGCAGATTGAGCCCGTCAACGGACAGGTGACGGTCCTGGTTATGTGCCACACTCGAGAGCTGGCCTTCCAGATCAGCAAGGAGTATGAGCGCTTCTCCAAATACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGGGGCCTGTCCATCAAGAAGGACGAGGAGGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACGCCGGGCCGGATCCTGGCGCTTGTGCGGAACAGGAGCCTCAACCTGAAGAATGTGAAGCACTTCGTGTTGGACGAGTGCGACAAGATGCTGGAGCAGTTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGCCTGACACCCCACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGAGATCCGGCCCGTCTGCAGGAAGTTCATGCAAGACCCCATGGAGGTGTTTGTGGACGACGAAACCAAGCTCACGCTGCATGGGCTGCAGCAGTACTACGTCAAACTTAAGGACAGTGAGAAGAACCGCAAGCTCTTTGACCTCCTGGATGTGTTGGAGTTTAACCAGGTGGTGATATTTGTGAAGTCGGTGCAGCGCTGCATGGCCTTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCAGCCATTGCCATCCACAGGGGCATGGCCCAGGAGGAGCGCCTGTCACGTTATCAGCAGTTTAAGGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGAATGGACATTGAGCGTGTCAACATTGTCTTCAATTATGACATGCCCGAGGACTCAGACACCTACCTCCACCGCGTGGCCCGTGCGGGTCGCTTTGGTACCAAAGGCCTGGCCATTACTTTCGTGTCTGATGAGAATGATGCCAAAATCCTCAATGATGTCCAGGACCGGTTTGAAGTGAATGTGGCAGAGCTTCCAGAAGAAATAGACATCTCCACATACATTGAGCAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>||| |||| | ||| || ||| |||||| ||| | || ||||| |||| || | | ||| | ||| || ||| | || | ||||| ||||| | ||||| ||| ||||| |||||| |||||||||||||||||||| ||| ||||||| || ||||| ||||||||||||||||||| ||||||| | ||| || | || |||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| || ||||||||||| ||||| ||||| || |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||| |||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||| || || |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||| ||| ||| ||||||||||||||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| | || || || ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| |||||||| ||||| || || |||||||| |||||||| ||||||||||| ||||| |||||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>17</Hit_num> + <Hit_id>gi|301771295|ref|XM_002920972.1|</Hit_id> + <Hit_def>PREDICTED: Ailuropoda melanoleuca ATP-dependent RNA helicase DDX39-like (LOC100469174), mRNA</Hit_def> + <Hit_accession>XM_002920972</Hit_accession> + <Hit_len>1484</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1858.76</Hsp_bit-score> + <Hsp_score>2060</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>62</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>9</Hsp_hit-from> + <Hsp_hit-to>1353</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1219</Hsp_identity> + <Hsp_positive>1219</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1345</Hsp_align-len> + <Hsp_qseq>AACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>AACCGGAGTCGGACGGCTGTCCTCGCAGCACGCGGAGGCGAGCGGCTAACCAGCACCATGGCAGAACAAGATGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTCCAGAGAGCACTCCTGCTGCCCCCAAGAAAGATGTCAAGGGTTCCTATGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCAGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTTGAGCATCCATCTGAGGTCCAGCACGAGTGTATTCCCCAAGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACGGCGGTCTTCGTGCTGGCCACCCTGCAGCAGATTGAGCCGGTCAACGGACAGGTGACAGTCCTGGTCATGTGTCATACGCGGGAGCTCGCCTTCCAGATCAGCAAAGAATATGAACGCTTCTCCAAGTACATGCCCAGTGTCAAGGTGTCCGTGTTCTTTGGGGGCCTTTCCATCAAGAAGGATGAAGAAGTATTGAAGAAGAACTGTCCCCATGTCGTAGTGGGGACACCAGGCCGAATCCTGGCACTAGTGCGAAACCGGAGCCTGAACCTGAAGAACGTGAAGCACTTCGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGTCTGACGCCCCACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGAGATCAGGCCGGTCTGCAGGAAGTTCATGCAAGACCCCATGGAGGTGTTTGTAGATGATGAGACCAAGCTCACGCTGCACGGACTGCAGCAGTACTACGTCAAACTCAAGGACAGCGAGAAGAACCGCAAGCTCTTCGATCTCTTGGATGTGTTGGAGTTTAACCAGGTGGTGATCTTCGTGAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCTGCCATCGCTATCCACAGGGGCATGGCCCAGGAGGAGCGTCTGTCACGCTATCAGCAATTCAAAGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAGCGAGTCAACATCGTTTTCAACTATGACATGCCCGAGGACTCGGACACCTACCTCCACCGAGTGGCCCGTGCAGGTCGCTTTGGGACCAAAGGTCTGGCTATCACTTTTGTATCTGATGAGAATGATGCCAAAATCCTCAATGACGTTCAGGACAGGTTTGAAGTGAACGTGGCAGAACTTCCTGAAGAAATTGACATCTCCACATATATTGAGCAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>||||| ||| ||| | | || | ||||| ||||||| || ||| | |||||| |||||||||||| ||||||||||| || ||| ||||||| || ||||| ||||||||||||||||||| ||||||||| || ||| |||| |||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| || ||| ||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| || || || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||| |||||||| || ||||| || ||||| | | ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||||||||||||||||| || ||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||||||| |||||||| || || ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||||||| || ||||| |||||||||||||| || |||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>18</Hit_num> + <Hit_id>gi|345787717|ref|XM_533895.3|</Hit_id> + <Hit_def>PREDICTED: Canis lupus familiaris DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_533895</Hit_accession> + <Hit_len>1449</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1835.31</Hsp_bit-score> + <Hsp_score>2034</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>92</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>2</Hsp_hit-from> + <Hsp_hit-to>1316</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1196</Hsp_identity> + <Hsp_positive>1196</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1315</Hsp_align-len> + <Hsp_qseq>CGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>CGCGGAGGCGAACGGGGAAGCAGCACCATGGCAGAACAAGATGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTCCAGAGAGCACTCCTGCTCCCCCCAAGAAAGATGTCAAGGGTTCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTTGAGCATCCATCTGAGGTCCAGCACGAGTGTATTCCCCAAGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACTGCGGTCTTCGTACTGGCCACCCTGCAGCAGATTGAGCCAGTTAATGGACAGGTGACAGTCTTGGTCATGTGCCACACACGGGAGCTAGCCTTCCAGATCAGCAAAGAGTATGAACGCTTCTCCAAGTACATGCCCAGTGTCAAGGTGTCTGTGTTCTTTGGGGGCCTTTCTATCAAGAAGGATGAAGAGGTATTGAAGAAGAACTGTCCTCATGTCGTGGTGGGGACACCAGGCCGGATCCTGGCGCTAGTGCGGAACCGGAGCCTGAACCTGAAGAACGTGAAGCACTTCGTGCTGGATGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGCTTGACACCCCATGAGAAGCAGTGCATGATGTTTAGCGCCACCCTGAGCAAGGAGATCAGGCCGGTCTGCAGGAAGTTCATGCAAGATCCCATGGAGGTGTTTGTAGACGACGAGACCAAGCTCACACTGCATGGACTGCAGCAGTACTACGTCAAGCTCAAGGACAGTGAGAAGAACCGCAAGCTCTTCGACCTGTTGGATGTGTTGGAGTTTAACCAGGTGGTGATCTTTGTGAAGTCCGTGCAACGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATTGCCATCCACAGGGGCATGGCCCAGGAGGAGCGTCTGTCGCGCTATCAGCAGTTCAAAGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAGCGAGTCAACATCGTCTTCAACTATGACATGCCTGAGGACTCGGACACCTACCTCCACCGAGTGGCCCGTGCAGGTCGCTTTGGGACTAAAGGTCTGGCTATTACTTTCGTGTCTGACGAGAATGATGCAAAAATCCTCAATGACGTTCAGGACCGGTTTGAAGTGAATGTGGCAGAACTTCCTGAAGAAATTGACATCTCCACGTATATTGAGCAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>||||||| ||||||||| ||||| |||||||||||| ||||||||||| || ||| ||||||| || ||||| ||||||||||||||||||| ||||||||| || |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||| || || ||||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||||| |||||||||||||||||||| || || || || ||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| || ||||| ||||||||||| |||||||| ||||| | | ||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| || |||||||||||||||||||| |||||||||||||||||||| ||| |||| || ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||||| || || ||||||||| ||||||||||||||||| | ||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||| || ||||| || || || ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||| ||||||||||| || || |||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>19</Hit_num> + <Hit_id>gi|344283234|ref|XM_003413330.1|</Hit_id> + <Hit_def>PREDICTED: Loxodonta africana ATP-dependent RNA helicase DDX39A-like (LOC100675770), mRNA</Hit_def> + <Hit_accession>XM_003413330</Hit_accession> + <Hit_len>1284</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1833.51</Hsp_bit-score> + <Hsp_score>2032</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>119</Hsp_query-from> + <Hsp_query-to>1402</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1284</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1177</Hsp_identity> + <Hsp_positive>1177</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1284</Hsp_align-len> + <Hsp_qseq>ATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAA</Hsp_qseq> + <Hsp_hseq>ATGGCAGAACAGGATGTGGAAAACGAGCTTCTGGATTACGAGGAAGATGAAGAGCCCCAGGCGCCTCCAGAGAGCACTCCAGCTCCATCCAAGAAAGATGTCAAGGGTTCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTAAAGCCAGAGCTACTGAGGGCCATTGTGGACTGTGGCTTTGAGCACCCATCTGAGGTCCAGCACGAGTGTATCCCCCAAGCCATCCTGGGGATGGACGTCCTGTGCCAAGCCAAGTCTGGAATGGGCAAGACAGCGGGTTTCGTGCTGGCCACCCTGCAGCAGATCGAGCCCGTCAATGGACAGGTGACGGTCCTGGTCATGTGCCATACTCGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTCTCCAAGTACATGCCTAATGTGAAGGTGTCGGTGTTCTTCGGTGGCCTCTCCATCAAGAAGGATGAAGAAGTGCTGAAGAAGAATTGTCCACATGTGGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTTGTGCGGAACAGGAGCCTCAACCTGAAGAATGTGAAGCACTTCGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGACGTGCAGGAAATCTTCCGCCTGACACCCCATGAGAAGCAGTGCATGATGTTCAGCGCTACCCTGAACAAGGAGATCCGGCCTGTCTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGATGATGAGACCAAGCTCACGCTGCATGGACTGCAGCAGTACTATGTCAAGCTCAAGGACAGCGAGAAGAACCGCAAACTCTTCGATCTCCTGGATGTGCTGGAGTTTAACCAGGTGGTGATCTTTGTGAAGTCGGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCAGCTATTGCCATCCACCGGGGCATGGCCCAGGAGGAACGCTTGTCACGATATCAGCAGTTCAAGGATTTCCAGCGGCGCATCCTCGTGGCCACCAATCTGTTCGGCCGAGGGATGGACATTGAGCGAGTCAACATCGTCTTCAACTACGACATGCCAGAGGACTCAGACACCTACCTCCACCGGGTGGCCCGTGCAGGTCGCTTTGGCACCAAAGGCCTTGCCATCACTTTTGTGTCTGACGAGAACGATGCCAAGATCCTCAACGACGTCCAGGACCGGTTTGAAGTGAATGTGGCAGAGCTTCCAGAAGAAATTGATATTTCCACATACATTGAACAGAGCCGGTAA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||| |||| ||||||||| |||||||| | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||| |||||||||||||||||||| || |||||||||||||| ||||| || ||||| ||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||| | || |||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||||||||||| ||||| ||||| ||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||| | ||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||| || || ||||||||||| || ||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>20</Hit_num> + <Hit_id>gi|471416597|ref|XM_004389765.1|</Hit_id> + <Hit_def>PREDICTED: Trichechus manatus latirostris DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_004389765</Hit_accession> + <Hit_len>1318</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1828.1</Hsp_bit-score> + <Hsp_score>2026</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>85</Hsp_query-from> + <Hsp_query-to>1402</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1318</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1196</Hsp_identity> + <Hsp_positive>1196</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1318</Hsp_align-len> + <Hsp_qseq>AGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAA</Hsp_qseq> + <Hsp_hseq>AGCAGCACGCGGATTTGAACCGAGAATCAGCACTATGGCGGAACAGGATGTGGAAAACGAGCTTCTGGATTATGAAGAAGATGAAGAGCCCCAGCCTCCTCCCGAGAGCACTCCAGCTCCCTCCAAGAAAGACGTCAAGGGTTCCTATGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTAAAGCCAGAGCTACTAAGGGCCATCGTGGACTGTGGCTTTGAGCACCCATCTGAGGTCCAGCACGAGTGTATCCCCCAAGCCATCCTGGGGATGGATGTCCTGTGCCAAGCCAAGTCTGGGATGGGCAAGACGGCGGTCTTTGTGCTGGCCACCCTGCAGCAGATCGAGCCCGTCAACGGACAGGTGACAGTCTTGGTTATGTGCCACACTCGGGAGCTGGCCTTCCAGATCAGCAAAGAGTATGAGCGCTTCTCCAAGTACATGCCCAATGTCAAGGTGTCTGTGTTCTTTGGTGGCCTTTCCATCAAGAAGGATGAAGAGGTGCTGAAGAAGAACTGTCCGCACGTTGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTTGTGCGAAACAGGAGCCTCAACCTGAAGAATGTGAAGCACTTCGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGATATGCGGCGGGATGTGCAGGAGATATTCCGCCTGACGCCCCACGAGAAGCAGTGCATGATGTTCAGTGCCACCCTGAACAAGGAGATCCGGCCCGTCTGCAGGAAGTTCATGCAAGATCCCATGGAGGTGTTTGTGGACGATGAGACCAAGCTCACGTTGCACGGACTGCAGCAGTACTACGTCAAGCTCAAGGACAGCGAGAAGAACCGCAAGCTCTTTGACCTCCTGGACGTGCTGGAGTTTAACCAGGTGGTGATCTTTGTGAAGTCGGTGCAGCGCTGCATGGCCTTGGCCCAGCTCCTCGTGGAACAGAACTTCCCAGCCATTGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCTTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGCATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAGCGGGTCAACATCGTCTTCAACTATGACATGCCTGAGGACTCAGATACTTACCTCCACCGGGTGGCCCGCGCGGGTCGCTTTGGCACCAAAGGCCTAGCTATCACTTTTGTGTCTGATGAGAACGATGCCAAAATTCTCAATGACGTTCAGGACCGGTTTGAAGTGAATGTGGCAGAGCTTCCAGAAGAAATTGACATATCTACATACATTGAGCAGAGCCGGTAA</Hsp_hseq> + <Hsp_midline>|||||| |||||| |||| | || ||||| ||||| |||||||||||||||||||| ||| ||||||| || ||||| |||||||||||| |||||| |||||||| ||||||||| | ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||| || |||||||||||||| ||||| || ||||| ||||||||||| ||||| ||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||||||||| ||| |||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||| || |||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||| | ||||| || ||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| || || ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| ||||| || |||||||| |||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>21</Hit_num> + <Hit_id>gi|426228875|ref|XM_004008473.1|</Hit_id> + <Hit_def>PREDICTED: Ovis aries DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_004008473</Hit_accession> + <Hit_len>1520</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1819.08</Hsp_bit-score> + <Hsp_score>2016</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>19</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1387</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1238</Hsp_identity> + <Hsp_positive>1238</Hsp_positive> + <Hsp_gaps>3</Hsp_gaps> + <Hsp_align-len>1389</Hsp_align-len> + <Hsp_qseq>GAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTG-TCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>GAGGCAGGAAGCGCAACAGCGCGTGTCGGGGCGCGAGAACGGTAACCGGAGCCGG--GTGCTCTCTTCGCAGCACGGGGAAGCGAACGAGGAATCAGTAGCATGGCGGAACAGGATGTGGAAAACGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCACCTCCAGAGAGCGCTCCACCTCCCCCCAAGAAAGACGTTAAGGGTTCCTATGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGTTGAAGCCAGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTTGAGCATCCATCAGAGGTCCAGCACGAGTGTATTCCGCAAGCCATCCTGGGCATGGACATCTTGTGCCAGGCCAAATCAGGGATGGGCAAGACAGCGGTTTTTGTGTTGGCCACTCTGCAGCAGATTGAGCCCGTCAACGGACAGGTGACGGTCCTGGTGATGTGCCACACTCGAGAGCTGGCCTTCCAGATCAGCAAGGAGTATGAGCGCTTCTCCAAATACATGCCCAGCGTCAAGGTGTCTGTGTTCTTTGGGGGCCTGTCCATCAAGAAGGATGAGGAGGTGTTGAAGAGGAACTGTCCCCACGTAGTGGTGGGGACGCCGGGCCGGATCCTGGCACTTGTGCGCAATAGGAGCCTCAACCTGAAGAATGTGAAGCACTTCGTGTTGGATGAGTGCGACAAGATGCTGGAGCAGCTGGATATGCGGCGGGACGTGCAGGAAATCTTCCGCCTGACCCCCCACGAGAAGCAGTGCATGATGTTCAGCGCCACCTTGAGCAAGGAGATCCGACCTGTGTGCAGGAAGTTCATGCAAGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGGCTACAGCAGTACTACGTGAAACTCAAGGACAGTGAGAAGAACCGCAAGCTCTTCGACCTCCTGGATGTGTTGGAGTTTAACCAGGTTGTGATCTTTGTGAAGTCAGTGCAGCGCTGCATGGCCTTGGCCCAGCTCCTGGTGGAACAGAACTTCCCAGCTATTGCCATCCACAGGGGCATGGCTCAGGAGGAGCGCCTGTCGCGCTATCAGCAGTTCAAGGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTCGGCCGAGGGATGGACATTGAGCGCGTCAACATCGTCTTCAATTATGACATGCCTGAGGACTCAGACACCTACCTCCACCGTGTGGCCCGTGCGGGTCGCTTCGGTACCAAAGGCCTGGCCGTTACTTTCGTGTCTGACGAGAACGATGCCAAAATCCTCAATGATGTCCAGGACCGGTTTGAAGTGAACGTGGCAGAGCTTCCAGAAGAAATTGACATCTCCACATACATTGAGCAGAGCCGGTAGCCAC</Hsp_hseq> + <Hsp_midline>||||||||||||||| || | |||||| | |||| | | ||||| || || ||| |||||| ||||| || ||| ||||| ||| ||| | |||||| |||||||||||||||||||| ||| ||||||| || ||||| |||||||||||||| |||| ||||||| | ||| ||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||| ||||| ||||| || |||||||||||||||||| || ||||||||||||| || |||||||||||||||||||| || ||| ||||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || || || ||||||||||||||||| || |||||||||| |||||||||||| || ||||||||||| |||||||| |||||||| || ||||| ||||||||| ||| ||| ||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||| |||||||||||||||||||||||||| || ||| |||||||| |||||||||||||||| | ||||| || |||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||| || || ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| || || ||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||| || ||||||||||| ||| | ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>22</Hit_num> + <Hit_id>gi|511847823|ref|XM_004748231.1|</Hit_id> + <Hit_def>PREDICTED: Mustela putorius furo DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), transcript variant X1, mRNA >gi|512013618|ref|XM_004824103.1| PREDICTED: Mustela putorius furo DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), transcript variant X1, mRNA</Hit_def> + <Hit_accession>XM_004748231</Hit_accession> + <Hit_len>1756</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1808.26</Hsp_bit-score> + <Hsp_score>2004</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>110</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>378</Hsp_hit-from> + <Hsp_hit-to>1673</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1180</Hsp_identity> + <Hsp_positive>1180</Hsp_positive> + <Hsp_gaps>1</Hsp_gaps> + <Hsp_align-len>1297</Hsp_align-len> + <Hsp_qseq>GCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>GCCA-CAGCATGGCGGAACAGGATGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTCCGGAGAGCACTCCTGCTCCCCCCAAGAAAGACGTCAAGGGTTCCTATGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCAGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTCGAGCATCCATCCGAGGTCCAGCACGAGTGTATTCCGCAAGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACGGCGGTCTTCGTGTTGGCCACCCTGCAGCAGATTGAGCCAGTCAGCGGACAGGTTTCAGTCCTGGTCATGTGCCACACGCGGGAGCTCGCCTTCCAGATCAGCAAAGAGTATGAACGCTTCTCCAAGTACATGCCCAGTGTCAAGGTGTCTGTGTTCTTCGGGGGCCTTTCCATCAAGAAGGATGAAGAAATACTGAAGAAGAACTGTCCCCATGTCGTAGTGGGGACACCAGGCCGAATCCTGGCACTAGTGCGGAACAGGAGCCTGAACCTGAAGAACGTGAAACACTTCGTGCTGGACGAGTGTGACAAGATGCTGGAGCAACTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGGCTGACGCCTCACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGAGATCAGGCCTGTCTGCAGGAAGTTCATGCAAGACCCCATGGAGGTGTTTGTGGATGATGAGACCAAGCTCACGCTACACGGACTGCAGCAGTACTATGTCAAGCTCAAGGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGTTGGAGTTTAACCAGGTGGTGATCTTCGTGAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTTGTGGAACAGAACTTCCCGGCCATCGCTATCCACAGGGGCATGGCCCAGGAGGAGCGTCTGTCGCGCTATCAGCAGTTCAAAGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAGCGAGTCAACATCGTCTTCAACTACGACATGCCCGAGGACTCAGACACCTACCTCCACCGAGTGGCCCGTGCAGGTCGCTTTGGGACCAAAGGTCTGGCTATCACTTTTGTATCTGATGAGAATGATGCCAAAATCCTCAATGACGTTCAGGACAGGTTTGAGGTGAACGTGGCCGAACTTCCTGAAGAAATCGACATCTCCACATATATTGAGCAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>|||| || |||||| ||||||||||||||||| || ||| ||||||| || ||||| ||||||||||||||||||| |||||||| || |||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| || ||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||| |||| ||||||||| | ||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| || ||||| |||||||| || |||||||| |||||| | | ||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| || ||||||||||| |||||||| || || ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||| || || ||||| |||||||| || |||||||||||||||||||| || |||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>23</Hit_num> + <Hit_id>gi|511847825|ref|XM_004748232.1|</Hit_id> + <Hit_def>PREDICTED: Mustela putorius furo DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), transcript variant X2, mRNA >gi|512013620|ref|XM_004824104.1| PREDICTED: Mustela putorius furo DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), transcript variant X2, mRNA</Hit_def> + <Hit_accession>XM_004748232</Hit_accession> + <Hit_len>1753</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1806.46</Hsp_bit-score> + <Hsp_score>2002</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>118</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>382</Hsp_hit-from> + <Hsp_hit-to>1670</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1174</Hsp_identity> + <Hsp_positive>1174</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1289</Hsp_align-len> + <Hsp_qseq>CATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>CATGGCGGAACAGGATGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTCCGGAGAGCACTCCTGCTCCCCCCAAGAAAGACGTCAAGGGTTCCTATGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCAGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTCGAGCATCCATCCGAGGTCCAGCACGAGTGTATTCCGCAAGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACGGCGGTCTTCGTGTTGGCCACCCTGCAGCAGATTGAGCCAGTCAGCGGACAGGTTTCAGTCCTGGTCATGTGCCACACGCGGGAGCTCGCCTTCCAGATCAGCAAAGAGTATGAACGCTTCTCCAAGTACATGCCCAGTGTCAAGGTGTCTGTGTTCTTCGGGGGCCTTTCCATCAAGAAGGATGAAGAAATACTGAAGAAGAACTGTCCCCATGTCGTAGTGGGGACACCAGGCCGAATCCTGGCACTAGTGCGGAACAGGAGCCTGAACCTGAAGAACGTGAAACACTTCGTGCTGGACGAGTGTGACAAGATGCTGGAGCAACTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGGCTGACGCCTCACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGAGATCAGGCCTGTCTGCAGGAAGTTCATGCAAGACCCCATGGAGGTGTTTGTGGATGATGAGACCAAGCTCACGCTACACGGACTGCAGCAGTACTATGTCAAGCTCAAGGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGTTGGAGTTTAACCAGGTGGTGATCTTCGTGAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTTGTGGAACAGAACTTCCCGGCCATCGCTATCCACAGGGGCATGGCCCAGGAGGAGCGTCTGTCGCGCTATCAGCAGTTCAAAGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAGCGAGTCAACATCGTCTTCAACTACGACATGCCCGAGGACTCAGACACCTACCTCCACCGAGTGGCCCGTGCAGGTCGCTTTGGGACCAAAGGTCTGGCTATCACTTTTGTATCTGATGAGAATGATGCCAAAATCCTCAATGACGTTCAGGACAGGTTTGAGGTGAACGTGGCCGAACTTCCTGAAGAAATCGACATCTCCACATATATTGAGCAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>|||||| ||||||||||||||||| || ||| ||||||| || ||||| ||||||||||||||||||| |||||||| || |||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| || ||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||| |||| ||||||||| | ||||||||||||||||||||| ||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| || ||||| |||||||| || |||||||| |||||| | | ||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| || ||||||||||| |||||||| || || ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||| || || ||||| |||||||| || |||||||||||||||||||| || |||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>24</Hit_num> + <Hit_id>gi|77736448|ref|NM_001034752.1|</Hit_id> + <Hit_def>Bos taurus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>NM_001034752</Hit_accession> + <Hit_len>1516</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1779.41</Hsp_bit-score> + <Hsp_score>1972</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>19</Hsp_query-from> + <Hsp_query-to>1404</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1386</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1226</Hsp_identity> + <Hsp_positive>1226</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1386</Hsp_align-len> + <Hsp_qseq>GAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACC</Hsp_qseq> + <Hsp_hseq>GAGACAGGAAGCGCAACAGCGCGTGTCGGGGCTCGAGAACGGTAACCGGAGTCGGGTGGCTCTCTTCGCAGCACGGGGAAGCGAACGAGGAATCAGCAGCATGGCGGAACAGGATGTGGAAAACGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCACCTCCAGAGAGCGCTCCACCTCCCCCCAAGAAAGACGTTAAGGGTTCCTATGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGTTGAAGCCGGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTTGAGCATCCATCAGAGGTCCAGCACGAGTGTATTCCACAAGCCATCCTGGGCATGGACATCTTGTGCCAGGCCAAGTCAGGGATGGGCAAGACAGCAGTTTTTGTGTTGGCCACTCTGCAGCAGATCGAGCCCGTCAACGGACAGGTGACAGTCCTAGTGATGTGCCACACTCGAGAGCTGGCCTTCCAGATCAGCAAGGAGTATGAGCGCTTCTCCAAATACATGCCCAGCGTCAAGGTGTCTGTGTTCTTTGGGGGCCTGTCCATCAAGAAAGATGAGGAGGTGTTGAAGAGAAACTGTCCCCACGTGGTGGTGGGGACACCGGGCCGGATCCTGGCACTTGTGCGCAATAGGAGCCTCAACCTGAGGAATGTGAAGCACTTCGTGTTGGATGAGTGCGACAAGATGCTGGAGCAGCTGGATATGCGGCGGGACGTGCAGGAAATCTTCCGCCTGACCCCCCACGAGAAGCAGTGCATGATGTTCAGCGCCACCTTGAGCAAGGAGATCCGACCTGTGTGCAGGAAGTTCATGCAAGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGGCTACAGCAGTACTATGTGAAACTCAAGGACAGTGAGAAGAACCGCAAGCTCTTCGACCTCCTGGATGTGTTGGAGTTTAACCAGGTTGTGATCTTTGTGAAGTCAGTGCAGCGCTGCATGGCCTTGGCCCAGCTCCTGGTAGAACAGAACTTCCCAGCTATTGCCATCCACAGGGGCATGGCCCAGGAAGAGCGCCTGTCGCGCTATCAGCAGTTCAAGGACTTCCAGCGGCGGATCCTTGTCGCCACCAATCTGTTCGGCCGAGGCATGGACATTGAGCGCGTCAACATCGTCTTCAATTATGACATGCCTGAGGACTCGGACACTTACCTCCACCGTGTGGCCCGTGCGGGTCGCTTCGGTACCAAAGGCCTGGCCGTTACTTTCGTGTCTGACGAGAACGATGCCAAAATCCTCAATGATGTCCAGGACCGGTTTGAAGTGAATGTGGCAGAGCTTCCAGAAGAAATTGACATCTCCACATACATTGAGCAGAGCCGGTAACC</Hsp_hseq> + <Hsp_midline>||| ||||||||||| || | |||||| | || | | | ||||| ||| || | |||||| ||||| || ||| ||||| ||| ||||| |||||| |||||||||||||||||||| ||| ||||||| || ||||| |||||||||||||| |||| ||||||| | ||| ||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||| ||||| ||||| || |||||||||||||||||| || |||||||||||||||| ||||||||||||||||| || || ||| ||||||| || |||||||| ||||| ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || || || ||||||||||| ||||| || |||||||||| ||||||||||| || ||||||||||| |||||||| |||||||| || ||||| ||||||||| ||| ||| | ||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || |||||||| |||||||||||||||||||||||||| || ||| |||||||| |||||||||||||||| | ||||| || |||||||||||||||||||||||| ||||||||||||| || || ||||||||||| || || ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| ||||| || |||||||| ||||| |||||||||||||| || || ||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| || ||||||||||| ||| | ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>25</Hit_num> + <Hit_id>gi|507964305|ref|XM_004688236.1|</Hit_id> + <Hit_def>PREDICTED: Condylura cristata DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_004688236</Hit_accession> + <Hit_len>1317</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1764.98</Hsp_bit-score> + <Hsp_score>1956</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>88</Hsp_query-from> + <Hsp_query-to>1402</Hsp_query-to> + <Hsp_hit-from>4</Hsp_hit-from> + <Hsp_hit-to>1317</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1181</Hsp_identity> + <Hsp_positive>1181</Hsp_positive> + <Hsp_gaps>1</Hsp_gaps> + <Hsp_align-len>1315</Hsp_align-len> + <Hsp_qseq>AGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAA</Hsp_qseq> + <Hsp_hseq>AGCACGCGGAGGCGAACGGGAA-CCAGCACCATGGCAGAACAGGATGTGGAGAATGAGCTTCTGGACTATGAGGAAGATGAAGAGCCCCAGGCGCCTGCAGAGAGCACTCCAGCTCCCCCTAAGAAAGATGTCAAGGGTTCCTACGTCTCCATCCACAGCTCAGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTTGAGCACCCATCAGAGGTGCAGCACGAGTGCATTCCTCAGGCCATTCTGGGCATGGATGTCTTGTGCCAGGCCAAGTCAGGGATGGGCAAGACGGCAGTCTTTGTGCTGGCCACCCTGCAGCAGATCGAGCCTGTCAACGGACAGGTAACAGTCTTGGTGATGTGCCACACACGGGAGCTAGCCTTTCAGATCAGCAAGGAATATGAGCGCTTCTCCAAGTACATGCCTAGTGTCAAGGTGTCTGTGTTCTTCGGAGGCCTCTCCATCAAGAAGGATGAAGAGGTATTGAAGAAGAACTGTCCCCATGTAGTGGTAGGGACTCCGGGCCGAATCCTGGCACTTGTGCGTAACCGGAGTCTCAACCTGAAGAATGTGAAGCACTTTGTGCTGGATGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTACAGGAGATCTTCCGCCTTACACCCCATGAGAAGCAGTGCATGATGTTCAGTGCCACCCTCAGCAAAGAGATCCGGCCCGTCTGCAGGAAATTCATGCAAGATCCCATGGAGGTATTTGTGGATGATGAGACCAAGCTCACCCTACATGGGCTGCAGCAGTACTATGTCAAGCTCAAAGACAGTGAGAAGAACCGCAAACTCTTCGACCTACTGGACGTGCTGGAGTTTAACCAGGTGGTGATCTTTGTGAAGTCGGTTCAGCGCTGCATGGCCCTAGCCCAGCTCCTTGTGGAGCAGAACTTCCCAGCCATTGCCATCCACAGGGGCATGGCCCAGGAGGAGCGGCTGTCACGCTATCAGCAGTTCAAGGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAACGAGTCAACATCGTTTTCAACTATGACATGCCTGAGGATTCAGACACCTACCTCCATCGGGTGGCTCGTGCAGGCCGCTTTGGCACCAAAGGCTTGGCCATCACTTTTGTGTCTGATGAGAACGATGCCAAAATCCTCAATGATGTTCAGGACCGGTTTGAAGTGAATGTGGCAGAACTTCCTGAGGAAATCGATATTTCCACATACATTGAGCAGAGCCGGTAA</Hsp_hseq> + <Hsp_midline>||| ||||||| ||||||| | |||||| ||||||||||||||||||||| || || ||| |||| || || ||||| |||||||||||||| ||| ||||||||| |||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| || || ||||| ||||| ||||||||||| |||||||| ||||||||||| ||| |||||||||||||||| |||||||||||||| || ||||| |||||||||||||| |||||||| |||||||||||||||||||| || ||| |||| ||||||||||| ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||||| |||||||| || ||||| || |||| ||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||| ||||| || |||||||| || |||||||| |||||||| |||||||||||||| |||||||| || |||||||||||||| || || || |||||||||||||| ||||| |||||||||||||||||||||||||| ||||| || || |||| ||||||||||||||||||||| | ||||| || ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| || ||||| |||||||||||||| || ||||||||||| || |||||||| || || || |||||||||||||||||| | |||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>26</Hit_num> + <Hit_id>gi|335282777|ref|XM_003123370.2|</Hit_id> + <Hit_def>PREDICTED: Sus scrofa ATP-dependent RNA helicase DDX39A-like, transcript variant 1 (LOC100515361), mRNA</Hit_def> + <Hit_accession>XM_003123370</Hit_accession> + <Hit_len>1553</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1737.93</Hsp_bit-score> + <Hsp_score>1926</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>12</Hsp_hit-from> + <Hsp_hit-to>1416</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1231</Hsp_identity> + <Hsp_positive>1231</Hsp_positive> + <Hsp_gaps>3</Hsp_gaps> + <Hsp_align-len>1407</Hsp_align-len> + <Hsp_qseq>AGCAGCAGCCCGACGCAAGAGGCAGGAAGCGC-AGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>AGCCGCAGTCGGACGTCGGAGACAGGAAGCGCGAACCGCTGGAGTCGGGCCGCGCGACCCGTAACCAGAGTCGGGAGA--CTCCTCGCAGCACGCGGAGGCGAACGAGAAATCAGTGTCATGGCGGAACAGGATGTGGAAAATGAGCTTCTGGATTATGAAGAAGATGAAGAGCCCCAGGCTCCTCCAGAGAATGCTCCAGCTCCCCCCAAGAAAGATGTCAAGGGTTCCTATGTTTCTATCCACAGCTCTGGCTTCCGGGACTTTCTACTGAAGCCAGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTCGAGCATCCATCTGAGGTCCAGCACGAATGTATTCCACAAGCCATCCTGGGCATGGACGTCCTATGCCAGGCCAAGTCAGGCATGGGCAAGACTGCAGTTTTTGTACTGGCCACCCTGCAGCAGATTGAGCCCGTCAATGGACAGGTGACAGTCCTAGTAATGTGCCACACTCGGGAGCTGGCCTTCCAGATTAGCAAGGAGTACGAGCGCTTCTCCAAGTACATGCCTAGTGTCAAGGTGTCTGTGTTCTTTGGGGGCCTTTCTATCAAGAAGGATGAAGAAGTTTTGAAGAAGAATTGTCCCCATGTCGTGGTGGGGACGCCGGGTCGGATCCTGGCACTTGTGCGGAACAGGAGCCTAAACCTGAAGAATGTCAAACACTTCGTGTTGGATGAGTGTGACAAGATGCTGGAGCAGTTGGACATGAGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCGCACGAGAAGCAGTGCATGATGTTCAGTGCTACCCTGAGCAAGGAGATCCGGCCCGTCTGCAGGAAGTTCATGCAAGATCCCATGGAAGTGTTTGTGGACGACGAAACCAAGCTCACGCTACATGGACTGCAGCAATACTATGTCAAACTGAAGGACAGTGAGAAGAACCGCAAGCTTTTCGACCTCCTGGATGTGTTGGAGTTTAACCAGGTGGTGATATTTGTGAAGTCTGTGCAGCGCTGCATGGCTCTGGCCCAGCTCCTTGTGGAACAGAACTTCCCAGCCATTGCTATCCACAGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGACTTCCAGCGGCGGATCCTGGTAGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAGCGCGTCAACATTGTCTTCAATTATGACATGCCCGAGGACTCAGACACCTACCTCCACCGGGTAGCCCGTGCGGGTCGCTTTGGTACCAAAGGCCTGGCCATTACTTTCGTGTCTGATGAGAATGATGCCAAAATCCTCAATGACGTCCAGGATCGGTTTGAAGTGAATGTGGCAGAGCTTCCAGAAGAAATTGACATCTCCACGTACATTGAACAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>||| |||| | |||| ||| |||||||||| | | || | ||| | ||| || | |||| ||| || || ||| | ||||| ||||||| ||||| | | ||| ||||||| ||||||||||||||||| || ||| ||||||| || ||||| ||||||||||||||||||| ||||| | ||||||||||| |||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||| || || ||||| || ||||||||||||||||||||||| |||||||||||||| || ||||||||||| || || || || ||||||||||| |||||||||||||| ||||| ||||||||||| ||||| || ||||||||||| ||||||||||||||||||| |||||||| || |||||||| |||||||||||||| || |||||||||||||||||||| || || || || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| | | ||| |||||||| || ||||| ||| |||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||| || ||||||||||||||||||||||| || || ||| |||||||| ||||||||||||||||| | || || || ||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||| ||||| || || |||||||| |||||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| || ||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>44.5672</Hsp_bit-score> + <Hsp_score>48</Hsp_score> + <Hsp_evalue>0.43337</Hsp_evalue> + <Hsp_query-from>1471</Hsp_query-from> + <Hsp_query-to>1525</Hsp_query-to> + <Hsp_hit-from>1499</Hsp_hit-from> + <Hsp_hit-to>1553</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>45</Hsp_identity> + <Hsp_positive>45</Hsp_positive> + <Hsp_gaps>2</Hsp_gaps> + <Hsp_align-len>56</Hsp_align-len> + <Hsp_qseq>ACTGTTGAGAAGCTAGAGATT-GTATGAGAATAAACTTGTTATTATGGAAGCCTGG</Hsp_qseq> + <Hsp_hseq>ACTGTTTAAAAACTGTAGATTTGTGTAAGAATAAATTT-TTATTATGGAAGCCAGG</Hsp_hseq> + <Hsp_midline>|||||| | || || ||||| || | |||||||| || |||||||||||||| ||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>27</Hit_num> + <Hit_id>gi|514445080|ref|XM_004999847.1|</Hit_id> + <Hit_def>PREDICTED: Cavia porcellus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (Ddx39a), transcript variant X2, mRNA</Hit_def> + <Hit_accession>XM_004999847</Hit_accession> + <Hit_len>1651</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1728.91</Hsp_bit-score> + <Hsp_score>1916</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>12</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>137</Hsp_hit-from> + <Hsp_hit-to>1532</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1224</Hsp_identity> + <Hsp_positive>1224</Hsp_positive> + <Hsp_gaps>3</Hsp_gaps> + <Hsp_align-len>1397</Hsp_align-len> + <Hsp_qseq>GACGCAAGAGGCAGGAAGCGCAGCAACTC-GTGT-CTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>GACGTAGGAGACAGGAAACGCGGCTTCTAAGAGTGCTG-GCGCGCGACGGATAACCGGCGTTGGACGGTACTTCTCGTAGCACGCGGGGGTGAACGAGAAACCAACACCATGGCAGAGCAGGACGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAGGAGCCCCAGGCGCCTGCCGAGAGCACCCCTGTGCTTCCCAAGAAGGACGTGAAGGGCTCCTATGTCTCCATCCACAGCTCGGGCTTCCGGGACTTCCTGCTGAAGCCAGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTCGAGCACCCCTCGGAGGTGCAGCATGAGTGCATCCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACGGCGGTCTTCGTGCTGGCCACCCTGCAGCAGATTGAGCCAGTCAACGGCCAGGTGTCTGTCCTGGTCATGTGTCACACACGGGAGCTGGCCTTCCAGATCAGCAAGGAGTACGAGCGCTTCTCCAAGTACATGCCCAGCGTCAAGGTGTCCGTGTTCTTTGGAGGCCTGTCCATCAAGAAGGATGAGGAGGTGCTGAAAAGGAACTGTCCCCATGTAGTGGTGGGAACCCCGGGTCGCATCCTGGCCCTTGTGCGGAACAGGAGCCTCAACCTGAAGAACGTGAAGCACTTCGTGCTGGATGAGTGTGACAAGATGCTGGAGCAACTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGCCTGACGCCACATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGGGCAAGGAGGTCCGGCCGGTCTGCAGGAAGTTCATGCAGGACCCCATGGAGGTGTTCGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTGAAGCTCAAAGACAGCGAGAAGAACCGCAAGCTCTTCGACCTGCTGGACGTGCTAGAGTTCAATCAGGTGGTGATCTTCGTGAAGTCGGTGCAGCGCTGCATGGCACTGGCCCAGCTCCTGGTGGAGCAGAACTTCCCAGCCATCGCCATCCACCGTGGCATGGCGCAGGAGGAGCGTCTGTCGCGCTACCAGCAGTTCAAGGACTTCCAGCGGCGCATCCTGGTGGCCACCAACCTGTTTGGACGCGGGATGGACATCGAGCGCGTCAACATAGTCTTCAACTACGACATGCCGGAGGACTCGGACACTTACCTGCATCGGGTGGCCCGAGCAGGCCGCTTTGGCACCAAAGGCCTGGCCATCACGTTCGTGTCCGATGAGAATGACGCCAAGATCCTTAACGATGTCCAGGACCGCTTTGAGGTGAACGTGGCCGAGCTCCCGGAAGAGATCGACATCTCCACATATATTGAGCAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>|||| | ||| |||||| ||| || || | || ||| |||| || |||| ||||| |||||| | || | | ||| ||||| | ||||| | | ||| || ||||||||| ||||| |||||||| || ||| ||||||| || ||||| || ||||||||||| ||| |||||||| || | | || ||||| ||| | ||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| || || ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||| || ||| |||| | ||||||||||||||| |||||||| |||||||| ||||||||||| || |||||||| |||||| ||| ||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| || || |||| ||||| ||||| || |||||| | |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||| || || |||||||||||||||||||| |||||||| || ||||| || |||||||| ||||| ||||| || || ||||||||||| ||||| || || ||||| || || || || || ||||||||||||||||| || |||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>28</Hit_num> + <Hit_id>gi|513022593|ref|XM_004872489.1|</Hit_id> + <Hit_def>PREDICTED: Heterocephalus glaber DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (Ddx39a), transcript variant X6, mRNA</Hit_def> + <Hit_accession>XM_004872489</Hit_accession> + <Hit_len>2047</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1721.7</Hsp_bit-score> + <Hsp_score>1908</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>19</Hsp_query-from> + <Hsp_query-to>1385</Hsp_query-to> + <Hsp_hit-from>449</Hsp_hit-from> + <Hsp_hit-to>1815</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1202</Hsp_identity> + <Hsp_positive>1202</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1367</Hsp_align-len> + <Hsp_qseq>GAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACA</Hsp_qseq> + <Hsp_hseq>GAGGCAGGAAACGCGGCCTTTAGAGTGCCGGCGCGCGACGGATAACCGGCGTTGGGCGCCACTTCTGGTAGCACGCGGAGGCGAACGAGAAACCAGCACCATGGCAGAACAGGATGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTCCCGAGAGCACCCCCACGCTCCCCAAGAAAGACGTGAAGGGCTCCTACGTGTCTATTCACAGCTCTGGCTTCCGAGATTTCCTGCTGAAGCCGGAGCTCCTGAGGGCCATTGTGGACTGTGGCTTTGAGCACCCCTCAGAGGTTCAGCATGAGTGCATCCCCCAGGCCATCCTGGGGATGGACGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACGGCAGTCTTCGTTCTGGCCACCCTGCAGCAGATTGAGCCTGTCAATGGCCAGGTGTCAGTCCTGGTTATGTGTCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAGTATGAGCGCTTCTCCAAGTACATGCCCAACGTCAAGGTGTCTGTGTTCTTTGGGGGCCTCTCCATCAAGAAGGATGAAGACGTTCTGAAGAGAAACTGTCCTCACGTCGTGGTGGGGACCCCAGGTCGGATTCTGGCGCTTGTGCGGAACAGGAGCCTCAACCTGAAGAATGTGAAGCACTTTGTGCTTGACGAGTGTGACAAGATGTTGGAGCAGCTGGACATGAGGCGGGACGTGCAGGAGATCTTCCGCCTGACACCCCACGAGAAGCAGTGCATGATGTTCAGTGCTACCCTGAGCAAGGAGATTCGGCCAGTCTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTAGACGATGAGACCAAGCTCACGCTGCATGGCCTGCAGCAGTACTATGTGAAGCTCAAGGACAGCGAGAAGAACCGAAAGCTCTTCGATCTCCTGGATGTGTTGGAGTTCAACCAGGTGGTGATCTTTGTGAAGTCGGTGCAGCGCTGCATGGCCCTGGCCCAGCTTCTGGTGGAGCAGAACTTCCCAGCCATCGCCATTCACCGAGGCATGGCACAGGAGGAGCGCCTGTCACGTTATCAGCAATTCAAGGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTATTTGGCCGAGGGATGGACATTGAGCGTGTCAACATCGTCTTCAACTATGACATGCCCGAAGACTCAGACACATACTTGCATCGGGTTGCCCGTGCAGGTCGCTTTGGTACCAAAGGCCTGGCCGTCACTTTCGTATCTGATGAGAATGATGCCAAAATTCTTAATGATGTCCAAGACCGATTTGAAGTGAATGTGGCTGAGCTTCCAGAAGAGATCGACATCTCCACATACA</Hsp_hseq> + <Hsp_midline>|||||||||| ||| || | | || |||| || |||| ||||| ||||| | || | | ||| ||||||| ||||| | | |||||| |||||||||||||||||||||||| || ||| ||||||| || ||||| ||||||||||||||||||| |||||||| || | | ||| ||||||||| | ||||| |||||||| || || ||||||||||||||||| || || ||||||||||||||||||||| ||||||| |||||||||||||||||||| || || ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||| || |||||| | |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||| || || ||||||||||||||||||||||| || |||||| |||||||| || ||||||||||||||||| || || || |||||||| |||||||| |||||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||| || ||||| || |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| || || ||||| ||||| ||||||||||| |||||||| |||||| |||||||| ||||||| ||||||||| | ||||| || ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || ||||| ||||| ||| |||| ||||| ||||| || ||||||||||| ||||||||||| ||| ||||||| || ||||| ||||||||||||||||| || ||||| ||||| ||||| |||||||| |||||||| || |||||||| || |||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>46.3705</Hsp_bit-score> + <Hsp_score>50</Hsp_score> + <Hsp_evalue>0.124163</Hsp_evalue> + <Hsp_query-from>1471</Hsp_query-from> + <Hsp_query-to>1519</Hsp_query-to> + <Hsp_hit-from>1998</Hsp_hit-from> + <Hsp_hit-to>2047</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>41</Hsp_identity> + <Hsp_positive>41</Hsp_positive> + <Hsp_gaps>1</Hsp_gaps> + <Hsp_align-len>50</Hsp_align-len> + <Hsp_qseq>ACTGTTGAGAAGCTAGAGATT-GTATGAGAATAAACTTGTTATTATGGAA</Hsp_qseq> + <Hsp_hseq>ACTGTTGAAAAGCTGTAGATTTGTGTAAGAATACATTTTTTATTATGGAA</Hsp_hseq> + <Hsp_midline>|||||||| ||||| ||||| || | |||||| | || |||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>29</Hit_num> + <Hit_id>gi|395837043|ref|XM_003791407.1|</Hit_id> + <Hit_def>PREDICTED: Otolemur garnettii ATP-dependent RNA helicase DDX39A-like (LOC100956179), mRNA</Hit_def> + <Hit_accession>XM_003791407</Hit_accession> + <Hit_len>1335</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1714.49</Hsp_bit-score> + <Hsp_score>1900</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>98</Hsp_query-from> + <Hsp_query-to>1402</Hsp_query-to> + <Hsp_hit-from>31</Hsp_hit-from> + <Hsp_hit-to>1335</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1163</Hsp_identity> + <Hsp_positive>1163</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1305</Hsp_align-len> + <Hsp_qseq>GAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAA</Hsp_qseq> + <Hsp_hseq>GACGAGCAGGGAACCAGCATCATGGCAGAGCAGCACGTAAAAAACGAACTTTCGGATTATGAGGAAGATGAAGAACTCCAGGCTCCTCCGGAGAGCACTCCAGCTCCCCCTAAGAAAGACGTCAAAGGATCTTATGTTTGCATCCATAGCTCTGGATTCCGGGACTTTCTGCTGAAGCCAGAGCTCCTGAGAGCCATTGTGGACTGTGGCTTTGAGCATCCGTCTGAGGTCCAGCACGAGTGCATTCCACAGGCCATCCTGGGCCTGGACGTCCTGTGCCAGGCCAGGTCTGGGATGGGCAAGACAGCAGTTTTTGTGCTGGCCACCCTGCAACAGATCGAGCCCATCAACGGACAGGTGACAGTCTTGGTCATGTGTCATACCAGAGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGGGCTTCTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTCTTCTTTGGTGGCCTCTCCATCAGGAAAGATGAAAAAGTATTGAAGAAAAACTGTCCCCATGTTGTGGTGGGGACCCCGGGCCGGATCCTGGCCCTCGTGCGGAACAGGAGCCTCAACCTGAAGAACGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCGGCCGGACATGCGGCGGCATGTGTGGGAGATCTTCCGCCTGACGCCCCGCGAGAAGCAGTGCATGATGTTCAGCGCTACCCTGAGCCAGGAGATCCGCCCTGTCTGCAGGAAGTTCATGCAGGATCCGATGGAGGTGTTTGCGGATGACGAGATCAAGCTCACGCTGCGTGGACTACAGCAGTTCTACGTCAAGCTCCGGGGCAGTGAGAAGAACCGCAAACTCTCTGATCTCTTGGAAGTGCTGGAGTTTGACCAGGTGGTCATCTTTGTCACGTCCATGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGGACAGAACTTCCCAGCCGTTGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCGGTCACGCTATCAGCAGTTCAAGGGTTTCCAGCAGCGGATCCTGGTGGCCACCGATCTGTTTGGCCGAGGGATGGATATTGAGCCAGTCGACATTGTCTTCAACTATGACATGCCGGAGGACTCTGACACCTACCTCCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTGGCCTTCACTTTTGTGTCTGACGAGAATGATGCCAAAATACTCAAGGATGTTCAGGATCGGTTTGGGGTGAATGTGGCAGAATTTCCAGAGGAAATTGCTATCTCCACATACATTAAGCAGAGCTGGTAA</Hsp_hseq> + <Hsp_midline>|| || | |||| |||||||||||||||| ||| | || ||||||| |||| |||||| || ||||| ||||| | ||||||||||| |||||||| ||||||||||||||||||||| |||| ||||| || |||| |||||| |||||||| ||||||||||||||||||||||| ||||||||| | ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||| || || |||||||||||||| || ||||| ||||| |||||||||||||||| ||| |||||||||| || || || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| ||| |||||| |||| |||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||| || | ||||||||||||||||||||||||||| ||||||||| |||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||| || || ||||||| ||||||||| ||| | |||||||||||||||||| |||| |||||||||||| |||||||||||| |||||||| | ||||| |||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||||| || |||| |||| |||| ||||| ||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| || || ||||| ||||||| || |||||||||||| ||||||||||||| | |||||||||||||| |||||||| |||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>30</Hit_num> + <Hit_id>gi|335282779|ref|XM_003354105.1|</Hit_id> + <Hit_def>PREDICTED: Sus scrofa ATP-dependent RNA helicase DDX39A-like, transcript variant 2 (LOC100515361), mRNA</Hit_def> + <Hit_accession>XM_003354105</Hit_accession> + <Hit_len>1520</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1714.49</Hsp_bit-score> + <Hsp_score>1900</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>117</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>94</Hsp_hit-from> + <Hsp_hit-to>1383</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1154</Hsp_identity> + <Hsp_positive>1154</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1290</Hsp_align-len> + <Hsp_qseq>TCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>TCATGGCGGAACAGGATGTGGAAAATGAGCTTCTGGATTATGAAGAAGATGAAGAGCCCCAGGCTCCTCCAGAGAATGCTCCAGCTCCCCCCAAGAAAGATGTCAAGGGTTCCTATGTTTCTATCCACAGCTCTGGCTTCCGGGACTTTCTACTGAAGCCAGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTCGAGCATCCATCTGAGGTCCAGCACGAATGTATTCCACAAGCCATCCTGGGCATGGACGTCCTATGCCAGGCCAAGTCAGGCATGGGCAAGACTGCAGTTTTTGTACTGGCCACCCTGCAGCAGATTGAGCCCGTCAATGGACAGGTGACAGTCCTAGTAATGTGCCACACTCGGGAGCTGGCCTTCCAGATTAGCAAGGAGTACGAGCGCTTCTCCAAGTACATGCCTAGTGTCAAGGTGTCTGTGTTCTTTGGGGGCCTTTCTATCAAGAAGGATGAAGAAGTTTTGAAGAAGAATTGTCCCCATGTCGTGGTGGGGACGCCGGGTCGGATCCTGGCACTTGTGCGGAACAGGAGCCTAAACCTGAAGAATGTCAAACACTTCGTGTTGGATGAGTGTGACAAGATGCTGGAGCAGTTGGACATGAGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCGCACGAGAAGCAGTGCATGATGTTCAGTGCTACCCTGAGCAAGGAGATCCGGCCCGTCTGCAGGAAGTTCATGCAAGATCCCATGGAAGTGTTTGTGGACGACGAAACCAAGCTCACGCTACATGGACTGCAGCAATACTATGTCAAACTGAAGGACAGTGAGAAGAACCGCAAGCTTTTCGACCTCCTGGATGTGTTGGAGTTTAACCAGGTGGTGATATTTGTGAAGTCTGTGCAGCGCTGCATGGCTCTGGCCCAGCTCCTTGTGGAACAGAACTTCCCAGCCATTGCTATCCACAGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGACTTCCAGCGGCGGATCCTGGTAGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAGCGCGTCAACATTGTCTTCAATTATGACATGCCCGAGGACTCAGACACCTACCTCCACCGGGTAGCCCGTGCGGGTCGCTTTGGTACCAAAGGCCTGGCCATTACTTTCGTGTCTGATGAGAATGATGCCAAAATCCTCAATGACGTCCAGGATCGGTTTGAAGTGAATGTGGCAGAGCTTCCAGAAGAAATTGACATCTCCACGTACATTGAACAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>||||||| ||||||||||||||||| || ||| ||||||| || ||||| ||||||||||||||||||| ||||| | ||||||||||| |||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||| || || ||||| || ||||||||||||||||||||||| |||||||||||||| || ||||||||||| || || || || ||||||||||| |||||||||||||| ||||| ||||||||||| ||||| || ||||||||||| ||||||||||||||||||| |||||||| || |||||||| |||||||||||||| || |||||||||||||||||||| || || || || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| | | ||| |||||||| || ||||| ||| |||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| || || |||||||| ||||| |||||||| || ||||||||||||||||||||||| || || ||| |||||||| ||||||||||||||||| | || || || ||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||| ||||| || || |||||||| |||||||| ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||||| ||||| || ||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>44.5672</Hsp_bit-score> + <Hsp_score>48</Hsp_score> + <Hsp_evalue>0.43337</Hsp_evalue> + <Hsp_query-from>1471</Hsp_query-from> + <Hsp_query-to>1525</Hsp_query-to> + <Hsp_hit-from>1466</Hsp_hit-from> + <Hsp_hit-to>1520</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>45</Hsp_identity> + <Hsp_positive>45</Hsp_positive> + <Hsp_gaps>2</Hsp_gaps> + <Hsp_align-len>56</Hsp_align-len> + <Hsp_qseq>ACTGTTGAGAAGCTAGAGATT-GTATGAGAATAAACTTGTTATTATGGAAGCCTGG</Hsp_qseq> + <Hsp_hseq>ACTGTTTAAAAACTGTAGATTTGTGTAAGAATAAATTT-TTATTATGGAAGCCAGG</Hsp_hseq> + <Hsp_midline>|||||| | || || ||||| || | |||||||| || |||||||||||||| ||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>31</Hit_num> + <Hit_id>gi|314122335|ref|NM_197982.3|</Hit_id> + <Hit_def>Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 (Ddx39), mRNA</Hit_def> + <Hit_accession>NM_197982</Hit_accession> + <Hit_len>1659</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1710.88</Hsp_bit-score> + <Hsp_score>1896</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>20</Hsp_query-from> + <Hsp_query-to>1404</Hsp_query-to> + <Hsp_hit-from>69</Hsp_hit-from> + <Hsp_hit-to>1451</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1211</Hsp_identity> + <Hsp_positive>1211</Hsp_positive> + <Hsp_gaps>2</Hsp_gaps> + <Hsp_align-len>1385</Hsp_align-len> + <Hsp_qseq>AGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACC</Hsp_qseq> + <Hsp_hseq>AGGCAGGAAGCACTGTAGCGCGCGTCCAGGGTCGCGGCGTAGAACCGGAC--GGGTGGCTCTCTTTGCAGCTCGCGGAGGCGAACCGGGCGGCAGTGCCATGGCAGAACAGGATGTGGAAAATGAACTTTTGGATTATGATGAAGATGAAGAGCCCCAGGCACCCCAGGAGAGCACTCCAGCTCCCCCGAAGAAAGATGTCAAAGGATCTTATGTCTCCATCCACAGTTCTGGCTTCCGGGACTTTCTACTGAAGCCAGAGCTCCTGAGAGCTATAGTTGACTGTGGCTTTGAGCATCCTTCAGAGGTCCAGCATGAGTGTATTCCCCAGGCCATTCTGGGTATGGATGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACAGCTGTGTTTGTGCTGGCCACCCTGCAGCAGATTGAGCCTGTCAATGGCCAGGTATCAGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAGTATGAGCGCTTCTCTAAGTACATGCCCAGTGTTAAGGTTTCTGTGTTCTTTGGAGGCCTCTCCATTAAGAAGGATGAAGATGTGTTGAAGAAGAACTGTCCTCATGTTGTGGTGGGGACACCAGGCCGGATCCTGGCACTTGTGCGGAGCAGGAGCCTCAACCTGAGGAATGTGAAGCACTTTGTGCTAGATGAATGTGACAAGATGCTGGAACAGCTGGACATGCGCCGGGATGTACAGGAGATCTTTCGTCTGACACCCCACGAGAAGCAGTGTATGATGTTCAGCGCCACCCTGAGCAAGGAGATCCGGCCAGTCTGCAGGAAGTTCATGCAGGATCCTATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACACTGCATGGGCTGCAGCAGTATTACGTCAAGCTCAAGGACAGTGAGAAGAACCGTAAGCTCTTCGACCTCCTCGACGTGCTAGAGTTTAACCAGGTGGTGATCTTTGTCAAGTCTGTGCAACGCTGCATGGCCCTGGCCCAGCTCCTAGTGGAGCAGAATTTCCCAGCTATCGCTATTCACCGAGGCATGGCCCAGGAGGAGCGCCTGTCCCGATACCAGCAGTTCAAGGACTTCCAGCGACGAATCCTGGTGGCTACTAATCTGTTTGGCAGAGGTATGGACATTGAGCGAGTCAACATTGTCTTCAACTATGACATGCCAGAGGACTCAGACACCTACCTTCACCGAGTGGCTCGTGCTGGTCGCTTTGGTACCAAGGGCCTGGCAGTCACTTTTGTATCGGATGAAAATGATGCCAAAATCCTTAATGATGTTCAGGACCGGTTTGAAGTGAATGTAGCTGAGCTTCCAGAGGAAATAGATATCTCCACATACATTGAGCAGAGCCGGTAACC</Hsp_hseq> + <Hsp_midline>||||||||||| | | | | || ||| | | ||||| | ||||| | || | |||||| ||||| ||||||| |||| ||| | ||| |||||||||||||||||||||||| || ||||||||||| |||||||| |||||||||||||| || || |||||||| ||||||||||| |||||||| |||| ||||| || || ||||||||||| |||||||||||||||||||| |||||||| ||||||||| | || || || ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| || || |||||||||||||| |||||||||||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| || ||||| ||||||||||| || || |||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| |||||||| || ||||||| |||||| ||| ||| | ||||||||||||||||||||| || || ||||||||||||||||| |||||||||||||| |||||||| ||||||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| || ||| | || ||||| ||||||||||||||| | ||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||||| || ||||| || ||||| |||||||||||||||||||||||||| || || |||||||||||||| |||||||| || ||||||||||| || |||||||||||| | || |||||||| |||||||||||||| ||||| ||||| |||||||| |||||||| ||||||||||| ||||| ||||| || || ||||||||||| ||||| ||||| || |||||||||| || || || ||||||||||||||||| ||||| || ||||||||||||||||| ||||| || || |||||||||||||| || |||||||||||||| |||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>32</Hit_num> + <Hit_id>gi|507579041|ref|XM_004672976.1|</Hit_id> + <Hit_def>PREDICTED: Jaculus jaculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (Ddx39a), mRNA</Hit_def> + <Hit_accession>XM_004672976</Hit_accession> + <Hit_len>1284</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1705.47</Hsp_bit-score> + <Hsp_score>1890</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>119</Hsp_query-from> + <Hsp_query-to>1401</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1283</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1148</Hsp_identity> + <Hsp_positive>1148</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1283</Hsp_align-len> + <Hsp_qseq>ATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTA</Hsp_qseq> + <Hsp_hseq>ATGGCAGAACAGGACGTGGAGAATGAGCTTTTGGATTATGATGAGTATGAAGAGCCCCAGGCACCCCAGGAGAGTACTCCAGCTCCCCCCAAGAAGGACGTCAAGGGGTCCTATGTGTCCATCCACAGCTCTGGCTTCCGGGACTTCCTGTTGAAGCCGGAGCTCCTGAGGGCCATAGTGGACTGCGGCTTCGAGCACCCCTCAGAGGTCCAGCATGAATGCATTCCCCAGGCCATCCTGGGCATGGATATCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACAGCCGTGTTCGTACTAGCTACCCTGCAGCAGATGGAGCCTGTCAATGGCCAGGTGTCAGTCCTCGTCATGTGCCACACCCGGGAGCTGGCCTTCCAAATCAGCAAAGAGTACGAGCGCTTCTCCAAGTACATGCCCAGTGTCAAGGTGTCTGTGTTCTTCGGGGGTCTCTCCATCAAGAAGGATGAGGAAGTGTTGAAAAAGAACTGTCCCCACATCGTGGTGGGCACGCCAGGCCGGGTCCTGGCGCTCGTGAGGAACAGGAGTCTCAACCTGAGGAACGTGAAGCACTTCGTGCTGGACGAGTGCGACAAGATGCTGGAACAGCTGGATATGCGGCGGGACGTGCAGGAGATCTTCCGGGTGACGCCCCACGAGAAGCAGTGTATGATGTTCAGTGCCACCCTGAGCAAGGAGATGCGGCCAGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTCGTGGACGACGAGACCAAGCTCACGCTGCACGGGCTGCAGCAGCACTACGTCAAGCTGAAGGACACAGAGAAGAACCGCAAGCTCTTTGACCTCCTGGACGTGCTGGAGTTCAACCAGGTGGTGATCTTCGTCAAGTCGGTGCAGCGCTGCATGGCTCTGGCCCAGCTCCTGGTGGAGCAGAACTTCCCAGCCATCGCCATACACCGGGGCATGGCCCAGGAAGAGCGCCTCTCGCGCTACCAGCAGTTTAAGGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGACATCGAGCGTGTCAACATCGTCTTCAACTATGACATGCCTGAGGACTCCGATACCTACCTCCATCGAGTGGCTCGCGCTGGTCGTTTTGGGACCAAGGGCCTGGCTATTACTTTTGTGTCTGATGAGAATGATGCCAAAATCCTCAATGATGTTCAGGACCGGTTTGAAGTGAATGTGGCAGAGCTTCCGGAAGAAATCGACATCTCCACATACATTGAGCAGAGCCGGTA</Hsp_hseq> + <Hsp_midline>|||||||||||||| ||||| || || ||||||||||| ||||| | |||||||||||||| || || ||||| || ||||||||||| ||||| ||| ||||||| ||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||| ||||| ||||| || || |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||| || || ||||| |||||||| ||||||||||| || |||||| | ||||| |||||||||||||| |||||||||||||||| |||||||| || || |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| || || ||||| |||||||||||||| |||| ||||| ||| ||| | ||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||| || |||||||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| || || |||| ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||| | |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| || ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| || |||||||| || || ||||| || || ||||| ||||| ||||| ||||| || || |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>33</Hit_num> + <Hit_id>gi|514445078|ref|XM_003461817.2|</Hit_id> + <Hit_def>PREDICTED: Cavia porcellus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (Ddx39a), transcript variant X1, mRNA</Hit_def> + <Hit_accession>XM_003461817</Hit_accession> + <Hit_len>1489</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1703.67</Hsp_bit-score> + <Hsp_score>1888</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>113</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>77</Hsp_hit-from> + <Hsp_hit-to>1370</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1154</Hsp_identity> + <Hsp_positive>1154</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1294</Hsp_align-len> + <Hsp_qseq>AGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>AGCACCATGGCAGAGCAGGACGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAGGAGCCCCAGGCGCCTGCCGAGAGCACCCCTGTGCTTCCCAAGAAGGACGTGAAGGGCTCCTATGTCTCCATCCACAGCTCGGGCTTCCGGGACTTCCTGCTGAAGCCAGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTCGAGCACCCCTCGGAGGTGCAGCATGAGTGCATCCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACGGCGGTCTTCGTGCTGGCCACCCTGCAGCAGATTGAGCCAGTCAACGGCCAGGTGTCTGTCCTGGTCATGTGTCACACACGGGAGCTGGCCTTCCAGATCAGCAAGGAGTACGAGCGCTTCTCCAAGTACATGCCCAGCGTCAAGGTGTCCGTGTTCTTTGGAGGCCTGTCCATCAAGAAGGATGAGGAGGTGCTGAAAAGGAACTGTCCCCATGTAGTGGTGGGAACCCCGGGTCGCATCCTGGCCCTTGTGCGGAACAGGAGCCTCAACCTGAAGAACGTGAAGCACTTCGTGCTGGATGAGTGTGACAAGATGCTGGAGCAACTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGCCTGACGCCACATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGGGCAAGGAGGTCCGGCCGGTCTGCAGGAAGTTCATGCAGGACCCCATGGAGGTGTTCGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTGAAGCTCAAAGACAGCGAGAAGAACCGCAAGCTCTTCGACCTGCTGGACGTGCTAGAGTTCAATCAGGTGGTGATCTTCGTGAAGTCGGTGCAGCGCTGCATGGCACTGGCCCAGCTCCTGGTGGAGCAGAACTTCCCAGCCATCGCCATCCACCGTGGCATGGCGCAGGAGGAGCGTCTGTCGCGCTACCAGCAGTTCAAGGACTTCCAGCGGCGCATCCTGGTGGCCACCAACCTGTTTGGACGCGGGATGGACATCGAGCGCGTCAACATAGTCTTCAACTACGACATGCCGGAGGACTCGGACACTTACCTGCATCGGGTGGCCCGAGCAGGCCGCTTTGGCACCAAAGGCCTGGCCATCACGTTCGTGTCCGATGAGAATGACGCCAAGATCCTTAACGATGTCCAGGACCGCTTTGAGGTGAACGTGGCCGAGCTCCCGGAAGAGATCGACATCTCCACATATATTGAGCAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>|||| ||||||||| ||||| |||||||| || ||| ||||||| || ||||| || ||||||||||| ||| |||||||| || | | || ||||| ||| | ||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| || || ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||| || ||| |||| | ||||||||||||||| |||||||| |||||||| ||||||||||| || |||||||| |||||| ||| ||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| || || |||| ||||| ||||| || |||||| | |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||| || || |||||||||||||||||||| |||||||| || ||||| || |||||||| ||||| ||||| || || ||||||||||| ||||| || || ||||| || || || || || ||||||||||||||||| || |||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>34</Hit_num> + <Hit_id>gi|514445082|ref|XM_004999848.1|</Hit_id> + <Hit_def>PREDICTED: Cavia porcellus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (Ddx39a), transcript variant X3, mRNA</Hit_def> + <Hit_accession>XM_004999848</Hit_accession> + <Hit_len>1521</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1701.86</Hsp_bit-score> + <Hsp_score>1886</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>114</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>110</Hsp_hit-from> + <Hsp_hit-to>1402</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1153</Hsp_identity> + <Hsp_positive>1153</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1293</Hsp_align-len> + <Hsp_qseq>GCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>GCACCATGGCAGAGCAGGACGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAGGAGCCCCAGGCGCCTGCCGAGAGCACCCCTGTGCTTCCCAAGAAGGACGTGAAGGGCTCCTATGTCTCCATCCACAGCTCGGGCTTCCGGGACTTCCTGCTGAAGCCAGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTCGAGCACCCCTCGGAGGTGCAGCATGAGTGCATCCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACGGCGGTCTTCGTGCTGGCCACCCTGCAGCAGATTGAGCCAGTCAACGGCCAGGTGTCTGTCCTGGTCATGTGTCACACACGGGAGCTGGCCTTCCAGATCAGCAAGGAGTACGAGCGCTTCTCCAAGTACATGCCCAGCGTCAAGGTGTCCGTGTTCTTTGGAGGCCTGTCCATCAAGAAGGATGAGGAGGTGCTGAAAAGGAACTGTCCCCATGTAGTGGTGGGAACCCCGGGTCGCATCCTGGCCCTTGTGCGGAACAGGAGCCTCAACCTGAAGAACGTGAAGCACTTCGTGCTGGATGAGTGTGACAAGATGCTGGAGCAACTGGACATGCGGCGGGACGTGCAGGAGATCTTCCGCCTGACGCCACATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGGGCAAGGAGGTCCGGCCGGTCTGCAGGAAGTTCATGCAGGACCCCATGGAGGTGTTCGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTGAAGCTCAAAGACAGCGAGAAGAACCGCAAGCTCTTCGACCTGCTGGACGTGCTAGAGTTCAATCAGGTGGTGATCTTCGTGAAGTCGGTGCAGCGCTGCATGGCACTGGCCCAGCTCCTGGTGGAGCAGAACTTCCCAGCCATCGCCATCCACCGTGGCATGGCGCAGGAGGAGCGTCTGTCGCGCTACCAGCAGTTCAAGGACTTCCAGCGGCGCATCCTGGTGGCCACCAACCTGTTTGGACGCGGGATGGACATCGAGCGCGTCAACATAGTCTTCAACTACGACATGCCGGAGGACTCGGACACTTACCTGCATCGGGTGGCCCGAGCAGGCCGCTTTGGCACCAAAGGCCTGGCCATCACGTTCGTGTCCGATGAGAATGACGCCAAGATCCTTAACGATGTCCAGGACCGCTTTGAGGTGAACGTGGCCGAGCTCCCGGAAGAGATCGACATCTCCACATATATTGAGCAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>||| ||||||||| ||||| |||||||| || ||| ||||||| || ||||| || ||||||||||| ||| |||||||| || | | || ||||| ||| | ||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| || || ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||| || ||| |||| | ||||||||||||||| |||||||| |||||||| ||||||||||| || |||||||| |||||| ||| ||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| || || |||| ||||| ||||| || |||||| | |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||| || || |||||||||||||||||||| |||||||| || ||||| || |||||||| ||||| ||||| || || ||||||||||| ||||| || || ||||| || || || || || ||||||||||||||||| || |||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>35</Hit_num> + <Hit_id>gi|426387516|ref|XM_004060165.1|</Hit_id> + <Hit_def>PREDICTED: Gorilla gorilla gorilla DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A, transcript variant 2 (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_004060165</Hit_accession> + <Hit_len>1423</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1698.26</Hsp_bit-score> + <Hsp_score>1882</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>982</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>976</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>962</Hsp_identity> + <Hsp_positive>962</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>976</Hsp_align-len> + <Hsp_qseq>AGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAG</Hsp_qseq> + <Hsp_hseq>AGCCCGACGCAAGAGGCAGGAAGCGCGGCAGCTCGTGTCTGAGCGCCCGGCGGAATACCGAAGTCAGAAGGCTCTGTTAGCAGCACGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCGGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACAGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGATGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCCTGGATGTGCTGGAGTTTAACCAG</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>794.769</Hsp_bit-score> + <Hsp_score>880</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1092</Hsp_query-from> + <Hsp_query-to>1539</Hsp_query-to> + <Hsp_hit-from>976</Hsp_hit-from> + <Hsp_hit-to>1423</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>445</Hsp_identity> + <Hsp_positive>445</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>448</Hsp_align-len> + <Hsp_qseq>GCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCT</Hsp_qseq> + <Hsp_hseq>GCCTGTCACGCTATCAGCAGTTTAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTATCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATTGAGCAGAGCCGGTAACCACCACGTGCCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCT</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>36</Hit_num> + <Hit_id>gi|512915096|ref|XM_004902910.1|</Hit_id> + <Hit_def>PREDICTED: Heterocephalus glaber DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (Ddx39a), mRNA</Hit_def> + <Hit_accession>XM_004902910</Hit_accession> + <Hit_len>1924</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1691.04</Hsp_bit-score> + <Hsp_score>1874</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>19</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>401</Hsp_hit-from> + <Hsp_hit-to>1788</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1204</Hsp_identity> + <Hsp_positive>1204</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1388</Hsp_align-len> + <Hsp_qseq>GAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>GAGGCAGGAAACGCGGCCTTTAGAGTGCCGGCGCGCGACGGATAACCGGCGTTGGGCGCCACTTCTGGTAGCACGCGGAGGCGAACGAGAAACCAGCACCATGGCAGAACAGGATGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTCCCGAGAGCACCCCCACGCTCCCCAAGAAAGACGTGAAGGGCTCCTACGTGTCTATTCACAGCTCTGGCTTCCGAGATNNNNNNNNNNNNNNNNNNNTCCTGAGGGCCATTGTGGACTGTGGCTTTGAGCACCCCTCAGAGGTTCAGCATGAGTGCATCCCCCAGGCCATCCTGGGGATGGACGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACGGCAGTCTTCGTTCTGGCCACCCTGCAGCAGATTGAGCCTGTCAATGGCCAGGTGTCAGTCCTGGTTATGTGTCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAGTATGAGCGCTTCTCCAAGTACATGCCCAACGTCAAGGTGTCTGTGTTCTTTGGGGGCCTCTCCATCAAGAAGGATGAAGACGTTCTGAAGAGAAACTGTCCTCACGTCGTGGTGGGGACCCCAGGTCGGATTCTGGCGCTTGTGCGGAACAGGAGCCTCAACCTGAAGAATGTGAAGCACTTTGTGCTTGACGAGTGTGACAAGATGTTGGAGCAGCTGGACATGAGGCGGGACGTGCAGGAGATCTTCCGCCTGACACCCCACGAGAAGCAGTGCATGATGTTCAGTGCTACCCTGAGCAAGGAGATTCGGCCAGTCTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTAGACGATGAGACCAAGCTCACGCTGCATGGCCTGCAGCAGTACTATGTGAAGCTCAAGGACAGCGAGAAGAACCGAAAGCTCTTCGATCTCCTGGATGTGTTGGAGTTCAACCAGGTGGTGATCTTTGTGAAGTCGGTGCAGCGCTGCATGGCCCTGGCCCAGCTTCTGGTGGAGCAGAACTTCCCAGCCATCGCCATTCACCGAGGCATGGCACAGGAGGAGCGCCTGTCACGTTATCAGCAATTCAAGGACTTCCAGCGGCGGATCCTGGTGGCCACCAATCTATTTGGCCGAGGGATGGACATTGAGCGTGTCAACATCGTCTTCAACTATGACATGCCCGAAGACTCAGACACATACTTGCATCGGGTTGCCCGTGCAGGTCGCTTTGGTACCAAAGGCCTGGCCGTCACTTTCGTATCTGATGAGAATGATGCCAAAATTCTTAATGATGTCCAAGACCGATTTGAAGTGAATGTGGCTGAGCTTCCAGAAGAGATCGACATCTCCACATACATTGAGCAGAGCCGGTAACCAC</Hsp_hseq> + <Hsp_midline>|||||||||| ||| || | | || |||| || |||| ||||| ||||| | || | | ||| ||||||| ||||| | | |||||| |||||||||||||||||||||||| || ||| ||||||| || ||||| ||||||||||||||||||| |||||||| || | | ||| ||||||||| | ||||| |||||||| || || ||||||||||||||||| || ||||| ||||||| |||||||||||||||||||| || || ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||| || |||||| | |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||| || || ||||||||||||||||||||||| || |||||| |||||||| || ||||||||||||||||| || || || |||||||| |||||||| |||||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||| || ||||| || |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| || || ||||| ||||| ||||||||||| |||||||| |||||| |||||||| ||||||| ||||||||| | ||||| || ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| || ||||| ||||| ||| |||| ||||| ||||| || ||||||||||| ||||||||||| ||| ||||||| || ||||| ||||||||||||||||| || ||||| ||||| ||||| |||||||| |||||||| || |||||||| || |||||||||||||||||||| |||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>46.3705</Hsp_bit-score> + <Hsp_score>50</Hsp_score> + <Hsp_evalue>0.124163</Hsp_evalue> + <Hsp_query-from>1471</Hsp_query-from> + <Hsp_query-to>1519</Hsp_query-to> + <Hsp_hit-from>1875</Hsp_hit-from> + <Hsp_hit-to>1924</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>41</Hsp_identity> + <Hsp_positive>41</Hsp_positive> + <Hsp_gaps>1</Hsp_gaps> + <Hsp_align-len>50</Hsp_align-len> + <Hsp_qseq>ACTGTTGAGAAGCTAGAGATT-GTATGAGAATAAACTTGTTATTATGGAA</Hsp_qseq> + <Hsp_hseq>ACTGTTGAAAAGCTGTAGATTTGTGTAAGAATACATTTTTTATTATGGAA</Hsp_hseq> + <Hsp_midline>|||||||| ||||| ||||| || | |||||| | || |||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>37</Hit_num> + <Hit_id>gi|507632955|ref|XM_004628246.1|</Hit_id> + <Hit_def>PREDICTED: Octodon degus ATP-dependent RNA helicase DDX39A-like (LOC101565452), mRNA</Hit_def> + <Hit_accession>XM_004628246</Hit_accession> + <Hit_len>1422</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1683.83</Hsp_bit-score> + <Hsp_score>1866</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>88</Hsp_query-from> + <Hsp_query-to>1406</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1320</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1166</Hsp_identity> + <Hsp_positive>1166</Hsp_positive> + <Hsp_gaps>1</Hsp_gaps> + <Hsp_align-len>1320</Hsp_align-len> + <Hsp_qseq>AGCGCGCGGAGAAGAACGGGGAGCCA-GCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCAC</Hsp_qseq> + <Hsp_hseq>AGCACGCGGAGGTGAACGAGAAACTAAGCACTATGGCAGAACAAGATGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTGCTGAGAGCACTCCCGCATTACCAAAGAAAGATGTGAAGGGCTCCTATGTCTCCATCCACAGCTCTGGCTTTCGGGACTTCCTGCTGAAGCCAGAGCTCCTGAGGGCCATAGTGGACTGTGGCTTTGAGCATCCCTCAGAGGTTCAGCATGAGTGCATCCCCCAGGCCATCCTGGGCATGGATGTCCTGTGCCAGGCCAAGTCTGGAATGGGCAAGACAGCAGTCTTCGTGCTGGCCACCCTACAGCAAATTGAGCCTGTCAACGGCCAGGTGGCAGTTCTGGTCATGTGTCACACAAGGGAGCTGGCCTTCCAGATCAGCAAGGAATACGAGCGTTTCTCCAAGTACATGCCCAGCATCAAGGTGTCTGTGTTCTTTGGAGGCCTCTCCATCAAGAAGGATGAGGAAGTACTGAAGAGAAACTGTCCTCACGTCGTGGTGGGAACCCCAGGCCGGATCCTGGCACTCGTGAGAAACAGGACCCTCAACCTGAAGAACGTGAAGCACTTTGTGCTTGATGAATGTGACAAGATGCTGGAGCAGCTAGATATGAGGCGGGACGTACAGGAGATCTTCCGCCTGACACCCCATGAGAAGCAGTGCATGATGTTCGGCGCCACTCTGAGCAAGGAGATCCGGCCAGTCTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTAGACGATGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTGAAGCTCAAGGACAGTGAGAAGAACCGCAAGCTGTTTGACCTCCTGGATGTATTAGAATTTAACCAGGTGGTGATCTTCGTGAAGTCCGTGCAGCGTTGCATGGCCCTGGCCCAGCTCCTGGTGGAGCAGAACTTCCCGGCCATCGCCATTCACCGTGGCATGGCACAGGAGGAGCGCCTATCACGATACCAGCAGTTCAAGGACTTCCAGAGGCGGATCCTGGTGGCCACTAATCTGTTTGGACGAGGGATGGACATTGAACGCGTCAACATCGTCTTCAACTACGATATGCCCGAAGACTCAGACACTTACCTGCACCGGGTTGCCCATGCAGGTCGCTTTGGTACCAAAGGCCTGGCCATCACTTTTGTGTCTGATGAGAATGATGCCAAAATTCTTAATGATGTTCAAGACCGGTTTGAAGTTAATGTGGCTGAGTTTCCAGAAGAGATCAATATCTCCACATACATTGAACAGAGTCGGTAACCAC</Hsp_hseq> + <Hsp_midline>||| ||||||| ||||| | | | | ||| ||||||||||| ||||||||||| || ||| ||||||| || ||||| |||||||||||||||||| |||||||| || || || |||||||| | ||||| ||||| || |||||||||||||||||||| |||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| | || ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||||||||| || || |||||||||||||||||||| ||||| |||||| |||||||| || ||||||||||| ||||| ||||| |||||||| |||||| | || |||| | ||| ||| ||||| ||||||||||||||||| || || ||||||||||||||||||||||| || ||| ||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||| ||| ||||||| | || |||||||||||| | |||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||| || |||||||||||||| |||||| ||||||||||||||||||| ||||||||||| || ||||||||||| || || |||||||||||||| |||||||| ||||| || ||||| ||||| |||||||||||||| |||| || ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||| || || ||||||||||||||||||||||| || ||||||| || ||| | |||||||||||||| || ||||| ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>38</Hit_num> + <Hit_id>gi|505846802|ref|XM_004616817.1|</Hit_id> + <Hit_def>PREDICTED: Sorex araneus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_004616817</Hit_accession> + <Hit_len>1287</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1673.01</Hsp_bit-score> + <Hsp_score>1854</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>118</Hsp_query-from> + <Hsp_query-to>1402</Hsp_query-to> + <Hsp_hit-from>3</Hsp_hit-from> + <Hsp_hit-to>1287</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1142</Hsp_identity> + <Hsp_positive>1142</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1285</Hsp_align-len> + <Hsp_qseq>CATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAA</Hsp_qseq> + <Hsp_hseq>CATGGCCGAACAGGACGTGGAGAATGAGCTCCTGGACTACGAGGAGGATGAGGAGCCCCAGGCCCCTGCCGAGAGCACCCCGGCCCCCCCCAAGAAGGATGTCAAGGGCTCCTACGTGTCCATCCACAGCTCTGGCTTCCGGGACTTCCTGCTGAAGCCGGAGCTGCTGCGGGCCATCGTGGACTGTGGCTTCGAGCACCCATCCGAGGTCCAGCATGAGTGCATCCCGCAGGCCATCCTGGGCATGGACATCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACGGCTGTGTTCGTGCTCGCCACCCTGCAGCAGATCGAGCCCATCAACGGACAGGTGGCAGTCCTGGTCATGTGCCACACGCGGGAGTTGGCCTTCCAGATCAGCAAGGAGTACGAGCGCTTCTCTAAGTACATGGCCAGCGTGAAGGTGTCCGTGTTCTTCGGGGGCCTCTCCATCAAGAAGGACGAGGAAGTGCTGAAGAGGAACTGCCCCCACGTGGTGGTGGGGACCCCCGGGCGCATCCTGGCGCTGGTCCGGAACCGGAGCCTCAGTCTGAAGAATGTGAAGCACTTCGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGCGACGTGCAGGAGATCTTCCGGCTGACCCCGCACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAGGGACATCCGGCCCGTGTGCCGCAAGTTCATGCAAGACCCCATGGAGGTGTTTGTGGATGACGAGACCAAGCTGACGCTGCACGGGCTGCAGCAGTACTACGTGAAGCTCAAGGACAGCGAAAAGAACCGCAAACTCTTCGACCTGCTGGATGTGCTGGAGTTCAACCAGGTGGTCATTTTCGTCAAGTCGGTGCAGCGTTGCATGGCCCTGGCACAGCTCCTGGTGGAGCAGAACTTCCCGGCCATTGCCATCCACCGGGGCATGGCGCAGGAGGAGCGCCTGTCGCGCTACCAGCAGTTCAAGGACTTCCAGCGCCGGATCCTGGTGGCCACCAATCTGTTTGGCCGCGGGATGGACATCGAACGGGTCAACATCGTCTTCAACTATGACATGCCTGAGGATTCGGACACCTACCTCCACCGGGTGGCCCGTGCCGGCCGCTTCGGGACCAAGGGCCTGGCCATCACCTTTGTATCGGACGAGAACGACGCCAAGATCCTCAATGACGTGCAGGACCGGTTTGAAGTGAACGTGGCGGAGCTGCCCGAGGAGATTGACATCTCGACTTACATTGAGCAGAGTCGGTAA</Hsp_hseq> + <Hsp_midline>|||||| |||||||| ||||| || || || |||| ||||| || || || ||||||||||| ||| |||||||| || || ||||| ||||| || ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| || || |||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || || |||||||| |||||||| |||||||| ||||| |||||||||||||| | ||||||||||||||||||||| ||||| |||||||||||||||||||||| || |||||||| || ||||||||| ||||||| |||||||| ||||||||||| || ||||||||||||||||| || |||||| |||||| |||||| ||||| || |||||||||||||| || |||||||||||||| || ||||| ||||| |||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | ||||||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||||| || ||||||||||| ||||| || || |||||||||||||||| ||||||||| | || ||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||| || || ||||| || ||||| ||||| |||||||| ||||| || |||||||| || ||||| |||||||||||||| ||||||||||||||||| || ||||| || || || ||||| || |||||||| || ||||| |||||||| ||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>39</Hit_num> + <Hit_id>gi|524975569|ref|XM_005087556.1|</Hit_id> + <Hit_def>PREDICTED: Mesocricetus auratus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (Ddx39a), mRNA</Hit_def> + <Hit_accession>XM_005087556</Hit_accession> + <Hit_len>1648</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1654.98</Hsp_bit-score> + <Hsp_score>1834</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>79</Hsp_query-from> + <Hsp_query-to>1405</Hsp_query-to> + <Hsp_hit-from>113</Hsp_hit-from> + <Hsp_hit-to>1439</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1163</Hsp_identity> + <Hsp_positive>1163</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1327</Hsp_align-len> + <Hsp_qseq>TCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCA</Hsp_qseq> + <Hsp_hseq>TCTCCTCGCAGCTCGCGGAGGCGAACCGGGCGACAGTGCCATGGCAGAACAAGATGTGGAAAACGAGCTTTTGGATTATGATGAAGATGAAGAGCCCCAAGCACCCCAGGAGAGCACTCCAGCTCCTCCGAAGAAAGATGTCAAAGGATCTTATGTCTCCATTCACAGTTCTGGTTTCCGGGACTTTCTGCTGAAGCCAGAGCTCCTGAGAGCCATAGTTGACTGCGGTTTTGAGCATCCTTCAGAGGTCCAGCATGAGTGTATTCCCCAGGCCATTCTGGGTATGGATGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACAGCTGTGTTTGTGCTGGCCACCCTGCAGCAGATCGAGCCCATCAATGGCCAGGTATCTGTACTGGTCATGTGCCATACAAGAGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCTAAGTACATGCCCAGTGTCAAGGTATCTGTGTTCTTTGGGGGCCTCTCCATTAAGAAGGATGAAGATGTGTTGAAGAAGAACTGTCCCCATGTTGTGGTGGGGACACCAGGCCGGATCCTGGCACTTGTACGGAGCAGGAGTCTGAACCTGAGGAATGTGAAGCACTTTGTGCTAGATGAGTGTGACAAGATGCTGGAACAGCTGGACATGCGTCGGGACGTGCAAGAGATCTTTCGCCTGACGCCCCATGAGAAGCAGTGCATGATGTTCAGTGCCACCCTGAGCAAGGAGATCCGACCGGTCTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACACTACACGGGCTACAGCAGTACTACGTCAAGCTCAAGGACAGTGAGAAGAACAGGAAGCTCTTTGACCTCCTTGACGTCCTAGAGTTTAACCAGGTGGTGATCTTTGTCAAATCTGTGCAACGTTGCATGGCCCTGGCCCAGCTTCTAGTGGAACAGAACTTCCCAGCCATTGCTATTCACCGAGGCATGCCCCAGGAGGAGCGCTTGTCCCGCTACCAGCAGTTCAAGGACTTCCAGCGGCGCATCTTGGTGGCTACCAATCTGTTTGGCAGAGGTATGGACATTGAGCGAGTCAACATCGTCTTCAACTATGACATGCCAGAGGACTCGGATACCTACCTTCACCGAGTGGCGCGTGCTGGTCGCTTTGGTACCAAAGGCCTGGCAGTCACTTTTGTGTCTGATGAAAATGATGCCAAAATCCTCAATGATGTTCAGGACCGGTTTGAAGTTAACGTGGCAGAGCTTCCAGAAGAAATAGATATCTCCACATACATTGAACAGAGCCGATAACCA</Hsp_hseq> + <Hsp_midline>|||| | ||||| ||||||| |||| ||| | ||| |||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||| || || || |||||||| |||||||| || |||||||| |||| ||||| || || ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||| | ||||| || ||||| || |||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| || || |||||||||||||| |||||||| ||||| |||| || ||||| | || |||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| || || |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||| || || |||| ||||| | | ||| | ||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||| || || ||||||||||||||||||||||| ||||||||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||| ||||| ||||||||||||||| | ||||||||||| ||| | || || || ||||||||||||||| | ||||| ||||| || ||||| || |||||||||||||||||||| || ||||| ||||||||||| ||||| || || ||||| |||||| |||||||||||||| |||| ||||| |||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||| | || |||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||| ||||| ||||| || || ||||||||||| ||||||||||| || |||||||||||||||| || ||||||||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||| ||||| || |||||||||||||| || |||||||| ||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>40</Hit_num> + <Hit_id>gi|354479466|ref|XM_003501883.1|</Hit_id> + <Hit_def>PREDICTED: Cricetulus griseus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 (Ddx39), mRNA</Hit_def> + <Hit_accession>XM_003501883</Hit_accession> + <Hit_len>1654</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1649.57</Hsp_bit-score> + <Hsp_score>1828</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>20</Hsp_query-from> + <Hsp_query-to>1405</Hsp_query-to> + <Hsp_hit-from>69</Hsp_hit-from> + <Hsp_hit-to>1452</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1198</Hsp_identity> + <Hsp_positive>1198</Hsp_positive> + <Hsp_gaps>2</Hsp_gaps> + <Hsp_align-len>1386</Hsp_align-len> + <Hsp_qseq>AGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCA</Hsp_qseq> + <Hsp_hseq>AGACAGGAAGCGTTGCCGCTCGCGTCCAGGGGCGCGACGTACAACC--AGACGGACGGCTCTCCTCGCAGCTCGCGGAGGCGAACCGGGCGACAGTGCCATGGCAGAACAAGATGTGGAAAATGAGCTTTTGGATTATGATGAAGACGAAGAGCCCCAAGCACCCCAGGAGAGCACTCCAGCTCCCCCGAAGAAAGATGTCAAAGGGTCTTACGTCTCCATTCACAGTTCTGGTTTCCGGGACTTTCTGCTGAAGCCAGAGCTCCTGAGAGCCATAGTTGACTGTGGCTTTGAGCATCCTTCAGAGGTCCAGCATGAGTGTATTCCCCAGGCCATTCTGGGTATGGATGTCCTGTGCCAGGCCAAGTCTGGGATGGGCAAGACAGCTGTGTTTGTGCTGGCCACCCTGCAGCAGATCGAGCCCATCAATGGCCAGGTATCTGTACTGGTCATGTGCCATACAAGGGAGCTGGCCTTCCAGATAAGCAAGGAATATGAGCGCTTCTCTAAGTACATGCCCAGTGTCAAGGTATCAGTGTTCTTTGGGGGCCTCTCCATTAAGAAGGATGAAGATGTGTTGAAGAAGAACTGTCCCCATGTTGTGGTGGGGACACCAGGCCGGATCCTGGCACTTGTACGGAGCAGGAGTCTGAACCTGAGGAATGTGAAACACTTTGTACTAGATGAATGTGACAAGATGCTGGAACAGCTGGACATGCGCCGGGACGTGCAAGAGATCTTTCGCCTGACACCCCATGAGAAGCAGTGCATGATGTTCAGTGCTACCTTGAGCAAGGAGATCCGGCCGGTCTGCAGGAAGTTCATGCAGGATCCCATGGAAGTGTTTGTGGATGACGAGACCAAGCTCACACTGCACGGGCTACAGCAGTACTACGTCAAGCTCAAGGACAGTGAGAAGAACCGGAAGCTCTTTGACCTCCTTGACGTCCTAGAGTTTAACCAGGTGGTGATCTTCGTCAAGTCTGTGCAACGTTGCATGGCCCTGGCCCAGCTCCTAGTGGAACAGAACTTCCCAGCCATTGCTATTCATCGAGGCATGCCCCAGGAGGAGCGCCTGTCTCGCTACCAGCAGTTCAAGGACTTCCAGCGGCGCATCCTGGTGGCTACCAATTTGTTTGGCAGAGGTATGGACATTGAGCGAGTCAACATCGTCTTCAACTATGACATGCCAGAGGACTCCGATACTTACCTTCACCGAGTGGCTCGTGCTGGTCGCTTTGGTACCAAAGGCCTGGCAGTCACTTTTGTATCTGATGAAAATGATGCCAAAATCCTCAATGATGTTCAGGATCGGTTTGAAGTTAATGTGGCAGAGCTTCCAGAAGAAATAGATATCTCCACATACATTGAACAGAGCCGATAACCA</Hsp_hseq> + <Hsp_midline>|| ||||||||| || |||| ||| | || || || | |||| || ||| | |||| | ||||| ||||||| |||| ||| | ||| |||||||||||| ||||||||||| || ||||||||||| |||||||| ||||||||||| || || || |||||||| ||||||||||| |||||||| |||| || || ||||| ||||| ||||| ||||| ||||||||||||||||||||||| ||||||||| | ||||| || ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| || || |||||||||||||| |||||||| ||||| |||| || ||||| | || |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| |||||||| || |||||||| || || |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||| || || |||| ||||| | | ||| | ||||||||| |||||||| || || || ||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| ||||||||||| || ||||||||||||||||||||||| || ||| |||||||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||| | || || || ||||||||||||||| | |||||||||||||| ||||| || ||||||||||||||||||||||| ||||| ||||||||||| ||||| || || || || |||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||| |||||| |||||||| | || |||||||| |||||||||||||||||||| ||||| |||||||| |||||||| || || ||||| ||||| ||||| || || ||||||||||| ||||||||||| || |||||||||| ||||| || ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||| ||||| || |||||||||||||| || |||||||| ||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>41</Hit_num> + <Hit_id>gi|55926218|ref|NM_053563.2|</Hit_id> + <Hit_def>Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (Ddx39a), mRNA</Hit_def> + <Hit_accession>NM_053563</Hit_accession> + <Hit_len>1740</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1647.76</Hsp_bit-score> + <Hsp_score>1826</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>118</Hsp_query-from> + <Hsp_query-to>1405</Hsp_query-to> + <Hsp_hit-from>303</Hsp_hit-from> + <Hsp_hit-to>1590</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1138</Hsp_identity> + <Hsp_positive>1138</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1288</Hsp_align-len> + <Hsp_qseq>CATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCA</Hsp_qseq> + <Hsp_hseq>CATGGCAGAACAGGATGTGGAAAATGAGCTTTTGGATTATGATGAAGATGAAGAGCCCCAGGTACCCCAGGAGAGCACTCCAGCTCCCCCGAAGAAAGATGTCAAAGGATCTTATGTCTCCATCCACAGTTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGAGAGCTATAGTTGACTGTGGCTTTGAACATCCTTCAGAGGTCCAGCATGAATGTATTCCCCAGGCCATTCTGGGTATGGATGTCCTGTGCCAAGCCAAGTCTGGGATGGGCAAGACAGCTGTGTTTGTGCTGGCCACCCTGCAGCAGATTGAACCCATCAATGGCCAGGTATCAGTACTGGTCATGTGCCACACAAGGGAGCTGGCCTTCCAGATCAGCAAGGAGTATGAGCGCTTCTCGAAGTACATGCCCAGTGTCAAGGTATCTGTGTTCTTTGGAGGCCTCTCCATTAAGAAAGATGAAGATGTGTTAAAGAAGAACTGTCCCCATGTTGTGGTGGGGACACCAGGCCGGATCCTGGCCCTCGTGCGGAGCAGGAGCCTCAACCTGAGGAATGTGAAGCACTTTGTGCTAGATGAATGTGACAAGATGCTGGAACAGCTGGACATGCGCCGGGATGTACAGGAGATCTTTCGTCTGACACCCCATGAGAAGCAATGTATGATGTTCAGCGCCACCCTGAGCAAGGAGATCCGGCCAGTCTGCAGGAAGTTCATGCAGGATCCTATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACACTGCATGGGCTGCAGCAGTATTACGTCAAACTCAAGGACAGTGAGAAGAATCGTAAACTCTTCGACCTCCTTGACGTGCTAGAGTTTAACCAGGTGGTGATCTTTGTCAAGTCTGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTAGTGGAACAGAATTTTCCGGCTATCGCTATTCACAGAGGCATGGCCCAGGAGGAGCGCCTGTCCCGATACCAGCAGTTCAAGGACTTCCAGCGTCGCATCCTAGTGGCTACTAATCTGTTTGGCAGAGGCATGGACATTGAGAGAGTCAACATCGTCTTCAACTATGACATGCCAGAGGACTCGGATACCTACCTGCACCGAGTGGCTCGTGCTGGTCGCTTTGGTACCAAGGGTCTGGCAGTCACTTTTGTGTCAGATGAGAATGATGCCAAAATCCTTAATGACGTTCAGGACCGGTTTGAAGTGAATGTGGCTGAGCTTCCAGAAGAAATAGATATCTCCACATACATTGAGCAGAGCCGGTAACCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||||| || || |||||||| ||||||||||| |||||||| |||| ||||| || || ||||||||||| ||||||||||||||||||||||||||||||||||||||| | || || || |||||||||||||| |||||||| |||||||||||||| || |||||||||||||| ||||| ||||| ||||||||||| |||||||| ||||||||||||||||| || || |||||||||||||| ||||||||||| || |||| || ||||| | || ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||| ||||||||||| || || |||||||| ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||| || ||||| |||||||| |||||||||| |||||| ||| ||| | ||||||||||||||||||||| || || ||||||||||||||||| |||||||||||||| |||||||| ||||||||||| || |||||||| || |||||||| || ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||||||||||||| |||||||||||||| || || ||||| || ||| | || ||||| ||||||||||||||| | ||||| |||||||| |||||||||||||||||||||||||||||||| ||||| ||||| || ||||| ||||| || ||| | |||||||||||||||||||||||||| || || |||||||||||||| |||||||| || ||||| ||||| || |||||||||||| | || |||||||| ||| |||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||| || || ||||||||||| ||||| || || || ||||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| || |||||||| ||||| || |||||||||||||| ||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>42</Hit_num> + <Hit_id>gi|504172084|ref|XM_004595565.1|</Hit_id> + <Hit_def>PREDICTED: Ochotona princeps DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), transcript variant X1, mRNA</Hit_def> + <Hit_accession>XM_004595565</Hit_accession> + <Hit_len>1292</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1617.1</Hsp_bit-score> + <Hsp_score>1792</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>119</Hsp_query-from> + <Hsp_query-to>1403</Hsp_query-to> + <Hsp_hit-from>11</Hsp_hit-from> + <Hsp_hit-to>1292</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1130</Hsp_identity> + <Hsp_positive>1130</Hsp_positive> + <Hsp_gaps>3</Hsp_gaps> + <Hsp_align-len>1285</Hsp_align-len> + <Hsp_qseq>ATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAAC</Hsp_qseq> + <Hsp_hseq>ATGACCGAGCAGGACGTGGAGAATGAGCTGCTGGACTACGAGGAGGACGAGGAGCCACAGGCGCCCACCGAGAGCACCCCAGCGCCCCCCACG---GACGTCAAGGGCTCCTACGTGTCTATCCACAGCTCGGGCTTCCGGGACTTCCTGCTGAAGCCGGAGCTGCTGCGTGCCATTGTGGACTGCGGCTTCGAGCACCCCTCGGAAGTCCAGCATGAGTGCATTCCGCAGGCCGTCCTGGGCATGGACGTCCTGTGTCAGGCCAAGTCTGGGATGGGCAAGACGGCGGTCTTTGTGCTGGCCACGCTGCAGCAGATCGAGCCGGTCAATGGACAGGTCACGGTCCTGGTCATGTGCCACACGCGGGAGCTGGCCTTCCAGATCAGCAAGGAATACGAGCGCTTCTCCAAGTACATGCCCAGTGTGAAGGTGTCCGTGTTCTTCGGGGGCCTGTCCATCAAGAAGGACGAGGAGGTGCTGAAGAGGAACTGCCCGCACGTGGTGGTGGGGACGCCGGGCCGCATCCTGGCCCTGGTGCGCAGTCGCAGCCTCAACCTGCGCAACGTGAAGCACTTCGTGCTGGACGAGTGTGACAAGATGCTGGAACAACTAGACATGCGGCGGGACGTGCAGGAGGTCTTCCGGCTCACGCCGCACGAGAAGCAATGCATGATGTTCAGCGCCACCCTGAGGAAGGAGATCCGGCCCGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGATGAGACGAAGCTCACGCTGCACGGGCTGCAGCAGTATTACGTCAAGCTCAAAGACAGTGAGAAAAACCGGAAGCTCTTCGACCTGTTGGACGTGTTGGAGTTCAACCAGGTGGTGATCTTCGTCAAGTCGGTGCAGCGCTGCATGGCGCTGGCCCAGCTCCTTGTGGAGCAGAACTTCCCAGCCATCGCCATCCACCGGGGCATGGCCCAGGAAGAGCGCCTGTCACGCTACCAACAGTTCAAGGACTTCCAGCGGCGCATCCTGGTGGCCACCAACCTGTTCGGCCGAGGCATGGACATCGAGCGCGTCAACATCGTCTTCAACTACGACATGCCCGAGGACTCGGACACCTACCTCCACCGGGTGGCCCGCGCAGGCCGCTTCGGCACCAAAGGCCTGGCCGTCACGTTCGTGTCGGACGAGAACGACGCCAAGATCCTCAATGACGTCCAGGACCGCTTTGAGGTGAACGTGGCCGAGCTGCCCGGGGAGATCGACATCTCCACATACATTGAGCAGAGCCGGTAAC</Hsp_hseq> + <Hsp_midline>||| | || ||||| ||||| || || || |||| ||||| || || || ||||| ||||| || |||||||| ||||| ||||| | | ||| ||||||| |||||||| || ||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||| |||||||| ||||| ||||| || || || |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||| ||||||||||| || || |||||||||||||| || || ||| |||||| |||||| || || || ||||||||||| ||||||||||||||||| || ||||| | | | ||| ||| ||| || ||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||||| ||||||||| ||||||| || || || ||||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||| |||||||| || || ||||| ||| ||||||| ||||||||| | |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||| || |||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| || || ||||| |||||||||||||| ||| |||| || ||||| |||||||| || ||||| ||||||||||||||||||||||| ||||| || || ||||| || || || | ||| |||||||||||||||||||| ||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>43</Hit_num> + <Hit_id>gi|507662009|ref|XM_004635622.1|</Hit_id> + <Hit_def>PREDICTED: Octodon degus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (Ddx39a), mRNA</Hit_def> + <Hit_accession>XM_004635622</Hit_accession> + <Hit_len>1284</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1604.48</Hsp_bit-score> + <Hsp_score>1778</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>119</Hsp_query-from> + <Hsp_query-to>1402</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1284</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1121</Hsp_identity> + <Hsp_positive>1121</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1284</Hsp_align-len> + <Hsp_qseq>ATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAA</Hsp_qseq> + <Hsp_hseq>ATGGCAGAACAAGATGTGGAAAATGAGCTTCTGGATTATGAGGAAGATGAAGAGCCCCAGGCTCCTGCTGAGAGCACTCCCACACTACCAAAGAAAGATGTGAAGGGCTCCTATGTCTCCATCCACAGCTCTGGCTTTCGGGACTTCCTGCTGAAACCAGAGCTCCTGAGGGCCATCGTGGACTGTGGCTTTGAGCATCCCTCAGAGGTTCAGCATGAGTGCATCCCCCAGGCCATCCTGGGCATGGATGTCCTGTGCCAGGCCAAGTCTGGAATGGGCAAGACGGCGGTCTTCGTGCTGGCCACCCTACAGCAAATTGAGCCTGTCAACGGCCAGGTGGCAGTTCTGGTCATGTGTCACACAAGGGAGCTGGCCTTCCAGATCAGCAAGGAATACGAGCGTTTCTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTTGGAGGCCTCTCCATCAAGAAGGATGAGGAAGTACTGAAGAGAAACTGTCCACACGTCGTGGTAGGAACCCCAGGCCGGATCCTGGCACTTGTGAGAAACAGGACCCTCAACCTGAAGAACGTGAAGCACTTTGTGCTTGATGAATGTGACAAGATGCTGGAGCAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCCGCCTGACACCCCATGAGAAGCAGTGCATGATGTTCAGCGCCACTCTGAGCAAGGAGATCCGGCCAGTCTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTAGACGATGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTGAAGCTCAAGGACAGTGAGAAGAACCGCAAGCTGTTTGACCTCCTGGATGTATTAGAATTTAACCAGGTGGTGATCTTCGTGAAGTCCGTGCAGCGTTGCATGGCCCTGGCCCAGCTCCTGGTGGAGCAGAACTTCCCCGCCATCGCCATTCACCGTGGCATGGCACAGGAGGAGCGCCTATCACGATACCAGCAGTTCAAGGACTTCCAGCGGCGGATCCTGGTGGCCACTAATCTGTTTGGACGAGGGATGGACATTGAACGTGTCAACATCGTCTTCAACTACGATATGCCCGAAGACTCAGACACTTACCTGCACCGGGTTGCCCGTGCAGGTCGCTTTGGTACCAAAGGCCTGGCCATCACTTTCGTGTCTGATGAGAATGACGCCAAAATTCTTAATGATGTTCAAGACCGGTTTGAAGTTAATGTGGCTGAGCTTCCAGAAGAGATCGACATCTCCACATACATTGAACAGAGTCGGTAA</Hsp_hseq> + <Hsp_midline>||||||||||| ||||||||||| || ||| ||||||| || ||||| |||||||||||||||||| |||||||| || | | || |||||||| | ||||| ||||| || |||||||||||||||||||| |||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||||| |||||| |||||||| || |||||||| || ||||| ||||| |||||||| || ||| | || |||| | ||| ||| ||||| ||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||| ||| ||||||| | || |||||||||||| | |||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| || || |||||||||||||| |||||||| ||||| || ||||| ||||| |||||||||||||| ||||| || ||||||||||| ||||||||||| ||||||||||| |||||||| |||||||| |||||||| || ||||| || || ||||||||||||||||||||||| || |||||||| || |||||||||||||||||||| || ||||| ||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>44</Hit_num> + <Hit_id>gi|403302192|ref|XM_003941698.1|</Hit_id> + <Hit_def>PREDICTED: Saimiri boliviensis boliviensis DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A, transcript variant 2 (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_003941698</Hit_accession> + <Hit_len>1429</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1471.03</Hsp_bit-score> + <Hsp_score>1630</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>7</Hsp_query-from> + <Hsp_query-to>982</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>973</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>912</Hsp_identity> + <Hsp_positive>912</Hsp_positive> + <Hsp_gaps>3</Hsp_gaps> + <Hsp_align-len>976</Hsp_align-len> + <Hsp_qseq>AGCCCGACGCAAGAGGCAGGAAGCGCAGCAACTCGTGTCTGAGCGCCCGGCGGAAAACCGAAGTTGGAAGTGTCTCTTAGCAGCGCGCGGAGAAGAACGGGGAGCCAGCATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAG</Hsp_qseq> + <Hsp_hseq>AGCCAGACGCAGGAGGCAGGAAGCGCGGCAGCTCGTGCCTGAGCTCCCGGCAGATAACCGAAGTCGGAAGGCTCTCCTAGCAGCACGCG---AAGAACTGCGAGCCAGCAGCATGGCAGAACAGGATGTGGAAAACGAGCTTTTGGATTACGACGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCGCTAAAAAAGACATGAAGGGATCCTATGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCAGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCGTCTGAGGTTCAGCACGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCGAAGTCTGGGATGGGCAAGACCGCAGTCTTCGTGCTAGCCACCCTGCAACAGATCGAGCCCGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTCTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGGGGCCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTTGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTTGTGCGGAACAGAAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGCGACAAAATGCTGGAGCAGCTCGACATGCGGCGGGACGTGCAGGAGATCTTCCGCCTGACGCCGCATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAAGTGTTTGTGGATGATGAGACCAAGCTCACGCTACACGGACTGCAGCAGCACTACGTCAAACTCAGAGACAGCGAGAAGAACCGGAAGCTCTTCGACCTCCTGGATGTGCTGGAGTTTAACCAG</Hsp_hseq> + <Hsp_midline>|||| |||||| |||||||||||||| ||| |||||| |||||| |||||| || ||||||||| ||||| |||| ||||||| |||| |||||| | ||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||| ||||||||||| |||||||| || ||| |||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>670.336</Hsp_bit-score> + <Hsp_score>742</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>1092</Hsp_query-from> + <Hsp_query-to>1539</Hsp_query-to> + <Hsp_hit-from>973</Hsp_hit-from> + <Hsp_hit-to>1429</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>423</Hsp_identity> + <Hsp_positive>423</Hsp_positive> + <Hsp_gaps>11</Hsp_gaps> + <Hsp_align-len>458</Hsp_align-len> + <Hsp_qseq>GCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCACCACGTG----------CCAGAGCCGCCCACCCGGAGCCGCCCGCATGCAGCTTCACCTCCCCTTTCCAGGCGCCACTGTTGAGAAGCTAGAGATTGTATGAGAATAAACTTGTTATTATGGAAGCCTGGCTCCCACCCCATCT</Hsp_qseq> + <Hsp_hseq>GCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGAGGGATGGACATTGAGCGAGTCAACATTGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAACCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAGCTTCCAGAGGAAATTGACATCTCCACATACATTGAGCAGAGCCGGTAACCCCCACGTGCCCTGCCAGTCCAGAGCCGCCAACCTGGAGCCTCCCGCACGCAGCTCCACCACCTCTTTCCAGACGCCCCTGTTCAGAAGCTGTAGATTGTATAAGAATAAACGTG-TATTATGGAAGCCTGGTTCCCACACCATCT</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| ||| |||||| |||||| |||||| |||| || |||||||| |||| ||||| ||||||| ||||||||| ||||||||| || |||||||||||||||| |||||| ||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>45</Hit_num> + <Hit_id>gi|395512965|ref|XM_003760655.1|</Hit_id> + <Hit_def>PREDICTED: Sarcophilus harrisii DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A (DDX39A), mRNA</Hit_def> + <Hit_accession>XM_003760655</Hit_accession> + <Hit_len>1618</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1352.01</Hsp_bit-score> + <Hsp_score>1498</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>119</Hsp_query-from> + <Hsp_query-to>1405</Hsp_query-to> + <Hsp_hit-from>186</Hsp_hit-from> + <Hsp_hit-to>1472</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1074</Hsp_identity> + <Hsp_positive>1074</Hsp_positive> + <Hsp_gaps>2</Hsp_gaps> + <Hsp_align-len>1288</Hsp_align-len> + <Hsp_qseq>ATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCA-AGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAACCA</Hsp_qseq> + <Hsp_hseq>ATGGCTGAACAAGACGTAGAAAATGAACTGCTTGATTATGAAGAGGATGAGGAGCCCCAGCC-CATGACAGAGAGCACGCCCACCCCTGCTAAGAAAGACGTGAAGGGCTCCTATGTCTCCATTCATAGCTCAGGCTTTAGGGATTTCCTTCTGAAGCCAGAGCTCCTGAGGGCTATTGTGGACTGTGGCTTTGAGCATCCATCTGAAGTCCAGCATGAATGTATTCCCCAAGCCATATTGGGAATGGATGTCCTGTGCCAAGCCAAGTCTGGAATGGGCAAGACTGCAGTCTTTGTGTTGGCTACCCTGCAGCAGATCGAGCCTGTGGATGGACAGGTAACCGTTCTTGTCATGTGCCACACTCGGGAGTTGGCCTTCCAGATCAGTAAGGAGTATGAGCGCTTCTCCAAATATATGCCCAGTGTCAAGGTCTCTGTGTTCTTTGGTGGCCTCTCGATCAAGAAGGATGAAGATGTTCTGAAGAAGAACTGCCCTCATGTAGTTGTGGGGACGCCCGGCCGGATTCTGGCCTTAGTACGCAACAAGAGTCTCAATCTGAAAAATGTGAAGCACTTTGTACTCGATGAGTGTGACAAGATGCTGGAACAGCTTGACATGCGCCGGGACGTTCAGGAGATCTTCCGCTTGACACCCCACGAGAAGCAGTGCATGATGTTCAGTGCCACGCTGAGTAAGGAGATAAGACCCGTCTGCAGAAAGTTCATGCAGGATCCAATGGAAGTTTTTGTGGACGATGAGACAAAATTGACACTGCACGGACTACAGCAGTACTATGTGAAGCTTAAGGACAGCGAGAAAAACAGAAAACTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGGTGATCTTTGTGAAGTCAGTGCAGCGCTGTGTAGCGTTGGCGCAGCTCCTAGTAGAACAGAACTTCCCAGCCATTGCCATCCATAGAGGAATGGCTCAGGAGGAGAGATTATCACGATATCAACAGTTCAAGGATTTTCAGCGGCGGATCCTGGTGGCCACCAATCTCTTTGGCCGAGGCATGGATATTGAGCGGGTCAATATAGTCTTCAATTATGACATGCCCGAGGACTCCGATACCTACCTGCACCGGGTGGCCAGGGCTGGCCGGTTCGGTACCAAGGGCTTGGCCATCACTTTCGTCTCTGACGAGGGGGATGCTAAGATCCTTAATGATGTCCAGGACCGGTTTGAAGTGAATGTGGCAGAGCTGCCCGAGGAAATCGACATCTCCACATACATTGAACAAAGTCGATAACCA</Hsp_hseq> + <Hsp_midline>||||| ||||| || || ||||| || || | ||||| || || || || ||||||||| | | | | ||||||||| || | || ||||||||||| | ||||| ||||| || ||||| || ||||| ||||| |||| || || |||||||| ||||||||| |||| || ||||||||||||||||||||||| ||||| ||||||||||| || |||||||| ||||| |||| ||||| ||||||||||| |||||||| || ||||||||||| || ||||| ||| |||| ||||| |||||||| |||||||| | |||||||| || || || |||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| || ||||||||||||| || ||||| || |||||||| || ||||| || ||||| | || || || | ||| ||| || || ||||||||||||||||| || || |||||||||||||||||||| ||||| |||||||| ||||| || ||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||| ||||| || | || || ||||| ||||||||||||||||| ||||| || ||||||||||| ||||| || | || |||||||| || ||||||||||| || || || || ||||| ||||| ||| | || ||||||||||||||||||||||||||||||||||||||| | ||||| || ||||||||||||||||| | || |||| |||||||| || || ||||||||||| ||||| |||||||| | || ||||| ||||||||| | | ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||| || ||||| ||||| || ||||| || || |||||||| |||||||| || ||||||||||||||||||||| |||| || || || || ||||| ||| | ||||||||||| || ||||||||| ||||| || ||||| ||||| |||||||||||||||||||| ||||||||||| || || |||||||||||||||||||||||||| || || || || ||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>46</Hit_num> + <Hit_id>gi|126323153|ref|XM_001366341.1|</Hit_id> + <Hit_def>PREDICTED: Monodelphis domestica ATP-dependent RNA helicase DDX39A-like (LOC100020548), mRNA</Hit_def> + <Hit_accession>XM_001366341</Hit_accession> + <Hit_len>1284</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1352.01</Hsp_bit-score> + <Hsp_score>1498</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>119</Hsp_query-from> + <Hsp_query-to>1402</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>1284</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1070</Hsp_identity> + <Hsp_positive>1070</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1284</Hsp_align-len> + <Hsp_qseq>ATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTAA</Hsp_qseq> + <Hsp_hseq>ATGGCTGAACAAGATGTAGAAAATGAATTGCTTGACTATGAAGAAGATGAGGAGCCCCAACCTCTGACAGAGAGCACACCTACCCCTGCTAAGAAGGATGTCAAGGGTTCCTATGTCTCCATTCATAGCTCTGGCTTCAGAGATTTTCTTCTGAAACCTGAGCTCTTGAGGGCTATTGTGGATTGTGGCTTTGAGCATCCATCTGAAGTCCAGCATGAGTGTATTCCTCAAGCCATCTTGGGAATGGATGTCCTTTGCCAGGCCAAGTCTGGAATGGGCAAGACAGCAGTCTTTGTGTTGGCTACACTACAGCAGATAGAGCCTGTGGATGGACAGGTGACAGTCCTTGTCATGTGCCATACTCGGGAATTGGCCTTCCAAATCAGTAAGGAATATGAGCGCTTCTCCAAGTACATGCCCAATGTCAAGGTTTCTGTGTTCTTTGGTGGCCTTTCGATCAAGAAGGATGAAGATGTTCTAAAGAAAAATTGTCCCCATGTAGTGGTGGGGACACCTGGCCGGATTCTGGCCTTAGTACGCAACAAGAGCCTCAATTTGAAAAATGTGAAGCACTTTGTACTGGATGAGTGTGACAAGATGCTGGAGCAGCTTGACATGCGCCGGGATGTGCAGGAAATCTTCCGCTTGACACCCCATGAGAAGCAGTGCATGATGTTCAGTGCCACCCTGAGTAAGGAGATAAGGCCTGTCTGCAGGAAGTTCATGCAGGATCCAATGGAAGTTTTTGTGGATGATGAGACAAAATTGACACTGCACGGGCTCCAGCAATACTACGTGAAGCTTAAGGACAGCGAGAAAAACAGAAAACTTTTTGATCTCTTGGATGTGCTAGAGTTTAACCAGGTTGTGATATTTGTGAAGTCAGTGCAGCGTTGTGTAGCCTTGGCGCAGCTCCTTGTGGAACAGAATTTCCCAGCCATTGCCATTCATAGAGGCATGGCCCAGGAGGAAAGGCTGTCACGGTACCAACAGTTCAAAGATTTCCAGCGACGGATCCTAGTGGCCACCAATCTGTTTGGTCGGGGAATGGATATTGAGCGGGTCAACATAGTCTTCAATTATGACATGCCCGAGGACTCTGATACCTACCTGCACCGGGTTGCCAGGGCTGGCCGATTTGGAACCAAGGGTTTGGCCATCACCTTTGTCTCTGATGAGGGAGATGCCAAGATCCTTAATGATGTCCAGGACCGGTTTGAAGTGAATGTGGCAGAACTGCCTGAGGAAATTGACATCTCCACATATATTGAAAAAAGCCGATAA</Hsp_hseq> + <Hsp_midline>||||| ||||| ||||| ||||| || | | || || || ||||| || |||||||| ||| |||||||||||| | || ||||||| || ||||||| ||||| || ||||| || |||||||||||| | || ||||| ||||| || |||||| || |||| || ||||| ||||||||||||||||| ||||| |||||||||||||| ||||| || |||||| |||| ||||| ||||| |||||||||||||| || |||||||||||||| ||||| ||| |||| || ||||||||||| |||||||| | ||||||||||| ||||| ||||||||||| || |||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||||| || || ||||||||||||||||| || | ||||| || ||||||||||| ||||||||||| || ||||| || ||||| | || || || | |||| ||| | || ||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||| ||||| || ||||||| ||||||||||||||||||||||| ||||| || |||||||| || ||||| || | || |||||||| || ||||| |||||||| || || || ||||| ||||| ||| | || || |||||||||||||||||||| |||||||||||||| | || || || |||||||||||||| || | ||| |||| |||||||| ||||| ||||| ||||| ||||| ||||| || | ||||||||||||||||| | |||||||| || || |||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||| || ||||| |||||||| ||||| || || |||||||| |||||||| || ||||||||||||||||| ||| |||| || || ||||| ||||| || | |||||||| ||||| ||||| ||| |||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||| || || | ||||| |||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>47</Hit_num> + <Hit_id>gi|213514235|ref|NM_001139608.1|</Hit_id> + <Hit_def>Salmo salar DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b (ddx39b), mRNA</Hit_def> + <Hit_accession>NM_001139608</Hit_accession> + <Hit_len>1528</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1278.07</Hsp_bit-score> + <Hsp_score>1416</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>119</Hsp_query-from> + <Hsp_query-to>1393</Hsp_query-to> + <Hsp_hit-from>39</Hsp_hit-from> + <Hsp_hit-to>1313</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1052</Hsp_identity> + <Hsp_positive>1052</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>1278</Hsp_align-len> + <Hsp_qseq>ATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAGAGCCCCAGGCTCCTCAAGAGA--GCA-CACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAG</Hsp_qseq> + <Hsp_hseq>ATGGCTGAGAATGACGTTGACAATGAGCTGCTGGACTATGAAGAGGACGAGGAGCCTCAGGGAGCCCCAGAGACTGCTGCCCCAGCAGGC---AAGAAGGAGGTGAAGGGCTCCTATGTCTCCATCCACAGCTCTGGCTTCAGAGACTTCCTGCTCAAACCAGAGCTGCTCCGCGCTATTGTCGACTGTGGCTTTGAGCATCCGTCTGAAGTTCAACATGAGTGCATCCCTCAGGCCATCTTGGGCATGGACATCCTGTGCCAGGCCAAGTCTGGTATGGGCAAAACGGCAGTGTTTGTTCTTGCCACACTACAGCAGATCGAGCCTGTGGATGGACAGGTGTCAGTTCTAGTAATGTGTCACACACGAGAGCTGGCCTTCCAGATCAGCAAAGAGTACGAGCGCTTCTCCAAGTACATGCCCACAGTCAAGGCAGCCGTGTTCTTCGGGGGCCTGTCTATCAAGAAGGATGAGGATGTGCTGAAGAAGAACTGCCCTCACATTGTGGTGGGAACCCCTGGCCGAATCCTGGCCCTCATCCGCAACAAGACCCTCAACCTAAAGAACGTCAAGCACTTTGTCCTGGATGAGTGTGACAAGATGCTGGAGCAGTTGGACATGAGGCGTGACGTACAGGACATCTTCAGGCTAACACCACATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTCAGCAAGGAGATTCGACCGGTCTGCCGCAAGTTCATGCAGGATCCCATGGAGGTGTTTGTAGATGATGAGACCAAGCTGACGCTGCACGGTCTGCAGCAGTACTACTGCAAGCTGAAGGACAGCGAGAAGAACCGCAAGCTCTTTGACCTGCTTGATGTGCTGGAGTTCAACCAGGTGGTGATCTTTGTCAAGTCAGTGCAGCGCTGTGTGGCGCTCTCTCAGCTACTGGTGGAACAAAACTTCCCTGCCATTGCCATCCACAGGGGCATGGCTCAGGAGGAGAGGCTGTCCCGGTACCAGCAGTTCAAGGACTTCCAAAGGCGGATCTTGGTGGCCACCAACCTGTTTGGCCGAGGGATGGATATCGAGCGGGTCAATATTGTCTTCAATTACGACATGCCTGAGGACTCGGACACCTACTTACACAGGGTGGCCCGTGCTGGGAGGTTTGGAACCAAGGGTCTGGCTGTGACCTTTGTGTCAGACGAGACCGATGCCAAGACTTTGAATGATGTGCAGGACCGCTTTGAGGTCAATGTGGCCGAGCTGCCAGAAGAGATCGACATCTCCACTTACATTGAGCAG</Hsp_hseq> + <Hsp_midline>||||| || | || || || || || || |||| || || || || || ||||| |||| | | ||||| || | ||||| | ||||| || | ||||| ||||| || ||||||||||||||||||||| | ||||| ||||| || || ||||| || || || || || |||||||||||||||||||| ||||| || || ||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||| || |||||||| || || || || || || ||||| ||||||||||| |||||||| | ||||||||| | || || || ||||| ||||| | ||||||||||||||||||||||| || || |||||||| |||||||||||||||| ||||||| | ||||||||||| || || || |||||||||||||| || ||| ||||||||||||| || || | |||||||| ||||| ||||| |||||||| ||| | || || | || | ||| ||||||||| || ||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||| || || ||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||| || || || || ||| | |||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| ||| || || ||||| ||||||||||||||||||||||| || | |||||||||||||| ||||||||| | ||||| |||||||||||||||||||| |||| || | ||||| || ||||| || |||||||| ||||| ||||||||| |||||||||| ||||||||| | ||||| || || |||||||||||||| ||||| |||||||| ||||||||||||| ||||||||||| |||||||| |||||||| ||||| || ||||| || |||||||||||||||||||||||||||||| | ||| |||||||||| || || | ||||| ||||| || || || | || |||||||| ||||||| |||||||| | | ||||| || |||||||| ||||| || |||||||| || || ||||| || |||||||||||||| ||||| ||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>48</Hit_num> + <Hit_id>gi|213511505|ref|NM_001141379.1|</Hit_id> + <Hit_def>Salmo salar ATP-dependent RNA helicase DDX39 (ddx39), mRNA</Hit_def> + <Hit_accession>NM_001141379</Hit_accession> + <Hit_len>1538</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1276.27</Hsp_bit-score> + <Hsp_score>1414</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>209</Hsp_query-from> + <Hsp_query-to>1393</Hsp_query-to> + <Hsp_hit-from>151</Hsp_hit-from> + <Hsp_hit-to>1335</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>994</Hsp_identity> + <Hsp_positive>994</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>1185</Hsp_align-len> + <Hsp_qseq>AAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAG</Hsp_qseq> + <Hsp_hseq>AAGAAGGAGGTGAAGGGCTCCTATGTCTCCATCCACAGCTCTGGCTTCAGAGACTTCCTGCTCAAACCAGAGCTGCTCCGCGCGATTGTCGACTGTGGCTTTGAGCATCCGTCTGAAGTTCAACATGAGTGCATCCCTCAGGCCATCCTGGGCATGGACATCCTGTGCCAGGCTAAGTCTGGTATGGGCAAGACGGCAGTGTTTGTTCTTGCCACACTACAGCAGATCGAGCCTGTGGATGGACAGGTGTCAGTTCTAGTAATGTGCCACACACGAGAGCTGGCCTTCCAGATCAGCAAAGAGTACGAGCGCTTCTCCAAGTACATGCCCACAGTCAAGGCAGCCGTGTTCTTTGGGGGCCTGTCTATCAAGAAGGACGAAGATGTGCTGAAGAAGAACTGCCCTCACATTGTGGTGGGAACCCCTGGCCGAATCCTGGCCCTCATCCGCAACAAGACCCTCAACCTAAAGAACGTCAAGCACTTTGTCCTGGATGAGTGTGACAAGATGCTGGAGCAGTTGGACATGAGGCGTGACGTACAGGACATCTTCAGGCTAACACCACATGAGAAGCAGTGCATGATGTTCAGCGCCACCCTCAGCAAGGAGATTCGACCGGTCTGCCGCAAGTTCATGCAGGATCCCATGGAGGTGTTTGTAGATGATGAGACCAAGCTGACGCTGCACGGTCTGCAGCAGTACTACTGCAAGCTGAAGGACAGCGAGAAGAACCGCAAGCTCTTTGACCTGCTTGATGTGCTGGAGTTCAACCAGGTGGTGATCTTTGTCAAGTCAGTGCAGCGCTGTGTGGCGCTTTCTCAGCTACTGGTGGAACAGAACTTCCCTGCCATTGCCATCCACAGGGGCATGGCTCAGGAGGAGAGGCTGTCCCGGTACCAGCAGTTCAAGGACTTCCAAAGGCGGATCTTGGTGGCCACTAACCTGTTTGGCCGAGGGATGGATATCGAGCGGGTCAATATTGTCTTCAATTACGACATGCCTGAGGACTCAGACACATACTTACACAGGGTGGCCCGTGCTGGTCGGTTTGGAACCAAGGGTCTGGCTGTGACCTTTGTGTCAGACGAGACAGATGCCAAGACTTTGAATGACGTGCAGGACCGCTTTGAGGTCAATGTGGCCGAGCTGCCAGAAGAGATCGACATTTCCACTTACATTGAGCAG</Hsp_hseq> + <Hsp_midline>||||| || | ||||| ||||| || ||||||||||||||||||||| | ||||| ||||| || || ||||| || || || || || |||||||||||||||||||| ||||| || || ||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||| || ||||||||||| || || || || || ||||| ||||||||||| |||||||| | ||||||||| | || || || ||||||||||| | ||||||||||||||||||||||| || || |||||||| |||||||||||||||| ||||||| | |||||||| || || || || ||||||||||| ||||| ||| ||||||||||||| || || | |||||||| ||||| ||||| |||||||| ||| | || || | || | ||| ||||||||| || ||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||| || || ||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||| || || || || ||| | |||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||| ||||||||||||||| ||| || || ||||| ||||||||||||||||||||||| || | |||||||||||||| ||||||||| | ||||| |||||||||||||||||||| |||| || | ||||| || ||||| ||||||||||| ||||| ||||||||| |||||||||| ||||||||| | ||||| || || |||||||||||||| ||||| |||||||| |||||||||| || ||||||||||| |||||||| |||||||| ||||| || ||||| || |||||||||||||||||||| ||||| ||| | ||| |||||||||| || ||||| ||||| ||||| || || || | || |||||||| ||||||| |||||||| | | |||||||| |||||||| ||||| || |||||||| || || ||||| || |||||||| ||||| ||||| ||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>49</Hit_num> + <Hit_id>gi|524974020|ref|XM_005086794.1|</Hit_id> + <Hit_def>PREDICTED: Mesocricetus auratus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B (Ddx39b), transcript variant X2, mRNA</Hit_def> + <Hit_accession>XM_005086794</Hit_accession> + <Hit_len>1447</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1265.45</Hsp_bit-score> + <Hsp_score>1402</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>116</Hsp_query-from> + <Hsp_query-to>1401</Hsp_query-to> + <Hsp_hit-from>157</Hsp_hit-from> + <Hsp_hit-to>1445</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1056</Hsp_identity> + <Hsp_positive>1056</Hsp_positive> + <Hsp_gaps>11</Hsp_gaps> + <Hsp_align-len>1293</Hsp_align-len> + <Hsp_qseq>ATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAG-------AGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTA</Hsp_qseq> + <Hsp_hseq>ATCATGGCAGAGAACGATGTGGACAACGAGCTCCTGGACTACGAAGACGACGAAGTGGAGACAGCCGCAGGGGG----AGATGGGACCGAGGCTCCTGCCAAGAAAGACGTCAAGGGCTCCTATGTCTCCATCCACAGCTCGGGCTTTCGAGACTTCCTGCTCAAGCCAGAGTTGCTCCGGGCCATCGTGGACTGTGGCTTTGAGCATCCGTCAGAGGTCCAGCATGAGTGCATCCCTCAGGCCATTCTGGGGATGGACGTCCTGTGCCAGGCCAAGTCGGGCATGGGGAAGACGGCCGTGTTTGTCCTGGCCACGCTGCAGCAGCTGGAGCCGATCACGGGGCAGGTGTCTGTGCTGGTGATGTGTCACACTAGGGAGCTGGCTTTTCAGATCAGCAAGGAATATGAGCGCTTCTCAAAGTACATGCCAAATGTCAAGGTGGCGGTGTTTTTTGGCGGTCTGTCCATCAAGAAGGACGAGGAGGTCCTGAAGAAGAACTGTCCGCACATCGTCGTGGGGACGCCTGGCCGGATTCTAGCCCTGGCTCGGAACAAGAGCCTGAACCTGAAGCACATCAAACACTTTATCTTGGACGAGTGTGACAAGATGCTTGAACAGCTCGACATGCGTCGGGATGTCCAGGAAATTTTTCGCATGACCCCCCATGAGAAGCAGGTCATGATGTTCAGTGCTACCCTGAGCAAAGAGATCCGGCCAGTCTGCCGCAAGTTCATGCAAGATCCTATGGAGATCTTCGTGGACGATGAGACCAAGTTGACGCTGCACGGGTTGCAGCAATACTACGTGAAACTGAAGGACAACGAGAAGAACCGGAAGCTCTTTGACCTTCTCGATGTCCTCGAGTTCAACCAGGTGGTGATCTTTGTGAAGTCTGTGCAGCGATGCATCGCCCTGGCCCAGCTTCTGGTGGAGCAGAACTTCCCAGCCATTGCTATCCACCGTGGCATGCCCCAGGAGGAGAGGCTCTCTCGGTATCAGCAGTTCAAGGATTTCCAGCGGCGGATTCTTGTGGCCACCAACCTGTTTGGCCGAGGCATGGACATTGAGCGTGTGAACATCGCCTTCAACTATGACATGCCAGAGGACTCGGACACCTACCTGCACCGGGTGGCCAGAGCAGGCCGGTTTGGCACCAAGGGCTTGGCCATCACATTTGTATCTGATGAGAGCGATGCTAAGATCCTCAATGATGTGCAGGACCGCTTCGAGGTCAACATCAGCGAGCTCCCTGATGAGATCGACATCTCCTCCTACATTGAGCAGACACGGTA</Hsp_hseq> + <Hsp_midline>||||||||||| | |||||||| ||||| || |||| ||||| || || |||| |||| |||| ||| | || ||||| | ||||||||| ||||||| ||||| || |||||||||||||| ||||| || ||||| ||||| ||||| ||| | || |||||||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||| || || || || |||||||| || |||||| | ||||| ||| || |||||| | || ||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||| || ||||||||||| | ||||||||| | ||||| || || ||||| |||||||||||||| || || || |||||||||||||||| || |||| |||||||| || ||||| || || || || | ||||| | |||| | | ||| ||| | | || |||||| | |||||||||||||||||||||| || ||||| |||||||| |||||||| ||||| || || ||| |||| || || ||||||||| |||||||||||| || ||||||||||| || |||||||| || ||| | ||||||||||| ||||| |||||| | || |||||||| ||||||||| | ||||||||||| ||||||| |||||||| ||||| || |||| ||||||||||| ||||||||||| || | ||||| || ||||| ||||||||| | ||||| || ||||| |||||||| ||||| |||||||||||||| || ||||||||||||||||| ||||| || |||||||| |||||| ||||||||||| | || || || |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||| ||||| || ||||||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||| | || || || ||||||||||| ||| | |||||||| ||||| ||||| |||| ||||| || ||||||||||| || |||||||| || || || || | || || || || || |||||||||||| | ||||| ||||||| |||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>50</Hit_num> + <Hit_id>gi|524974018|ref|XM_005086793.1|</Hit_id> + <Hit_def>PREDICTED: Mesocricetus auratus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B (Ddx39b), transcript variant X1, mRNA</Hit_def> + <Hit_accession>XM_005086793</Hit_accession> + <Hit_len>1555</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>1265.45</Hsp_bit-score> + <Hsp_score>1402</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>116</Hsp_query-from> + <Hsp_query-to>1401</Hsp_query-to> + <Hsp_hit-from>265</Hsp_hit-from> + <Hsp_hit-to>1553</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>1056</Hsp_identity> + <Hsp_positive>1056</Hsp_positive> + <Hsp_gaps>11</Hsp_gaps> + <Hsp_align-len>1293</Hsp_align-len> + <Hsp_qseq>ATCATGGCAGAACAGGATGTGGAAAACGATCTTTTGGATTACGATGAAGAGGAAG-------AGCCCCAGGCTCCTCAAGAGAGCACACCAGCTCCCCCTAAGAAAGACATCAAGGGATCCTACGTTTCCATCCACAGCTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGCGGGCCATCGTGGACTGTGGCTTTGAGCATCCTTCTGAGGTCCAGCATGAGTGCATTCCCCAGGCCATCCTGGGCATGGACGTCCTGTGCCAGGCCAAGTCCGGGATGGGCAAGACAGCGGTCTTCGTGCTGGCCACCCTACAGCAGATTGAGCCTGTCAACGGACAGGTGACGGTCCTGGTCATGTGCCACACGAGGGAGCTGGCCTTCCAGATCAGCAAGGAATATGAGCGCTTTTCCAAGTACATGCCCAGCGTCAAGGTGTCTGTGTTCTTCGGTGGTCTCTCCATCAAGAAGGATGAAGAAGTGTTGAAGAAGAACTGTCCCCATGTCGTGGTGGGGACCCCGGGCCGCATCCTGGCGCTCGTGCGGAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATGCTGGAGCAGCTGGACATGCGGCGGGATGTGCAGGAGATCTTCCGCCTGACACCACACGAGAAGCAGTGCATGATGTTCAGCGCCACCCTGAGCAAGGACATCCGGCCTGTGTGCAGGAAGTTCATGCAGGATCCCATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACGCTGCACGGCCTGCAGCAGTACTACGTCAAACTCAAAGACAGTGAGAAGAACCGCAAGCTCTTTGATCTCTTGGATGTGCTGGAGTTTAACCAGGTGATAATCTTCGTCAAGTCAGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTCGTGGAGCAGAACTTCCCGGCCATCGCCATCCACCGGGGCATGGCCCAGGAGGAGCGCCTGTCACGCTATCAGCAGTTCAAGGATTTCCAGCGGCGGATCCTGGTGGCCACCAATCTGTTTGGCCGGGGGATGGACATCGAGCGAGTCAACATCGTCTTTAACTACGACATGCCTGAGGACTCGGACACCTACCTGCACCGGGTGGCCCGGGCGGGTCGCTTTGGCACCAAAGGCCTAGCCATCACTTTTGTGTCTGACGAGAATGATGCCAAAATCCTCAATGACGTCCAGGACCGGTTTGAAGTTAATGTGGCAGAACTTCCAGAGGAAATCGACATCTCCACATACATCGAGCAGAGCCGGTA</Hsp_qseq> + <Hsp_hseq>ATCATGGCAGAGAACGATGTGGACAACGAGCTCCTGGACTACGAAGACGACGAAGTGGAGACAGCCGCAGGGGG----AGATGGGACCGAGGCTCCTGCCAAGAAAGACGTCAAGGGCTCCTATGTCTCCATCCACAGCTCGGGCTTTCGAGACTTCCTGCTCAAGCCAGAGTTGCTCCGGGCCATCGTGGACTGTGGCTTTGAGCATCCGTCAGAGGTCCAGCATGAGTGCATCCCTCAGGCCATTCTGGGGATGGACGTCCTGTGCCAGGCCAAGTCGGGCATGGGGAAGACGGCCGTGTTTGTCCTGGCCACGCTGCAGCAGCTGGAGCCGATCACGGGGCAGGTGTCTGTGCTGGTGATGTGTCACACTAGGGAGCTGGCTTTTCAGATCAGCAAGGAATATGAGCGCTTCTCAAAGTACATGCCAAATGTCAAGGTGGCGGTGTTTTTTGGCGGTCTGTCCATCAAGAAGGACGAGGAGGTCCTGAAGAAGAACTGTCCGCACATCGTCGTGGGGACGCCTGGCCGGATTCTAGCCCTGGCTCGGAACAAGAGCCTGAACCTGAAGCACATCAAACACTTTATCTTGGACGAGTGTGACAAGATGCTTGAACAGCTCGACATGCGTCGGGATGTCCAGGAAATTTTTCGCATGACCCCCCATGAGAAGCAGGTCATGATGTTCAGTGCTACCCTGAGCAAAGAGATCCGGCCAGTCTGCCGCAAGTTCATGCAAGATCCTATGGAGATCTTCGTGGACGATGAGACCAAGTTGACGCTGCACGGGTTGCAGCAATACTACGTGAAACTGAAGGACAACGAGAAGAACCGGAAGCTCTTTGACCTTCTCGATGTCCTCGAGTTCAACCAGGTGGTGATCTTTGTGAAGTCTGTGCAGCGATGCATCGCCCTGGCCCAGCTTCTGGTGGAGCAGAACTTCCCAGCCATTGCTATCCACCGTGGCATGCCCCAGGAGGAGAGGCTCTCTCGGTATCAGCAGTTCAAGGATTTCCAGCGGCGGATTCTTGTGGCCACCAACCTGTTTGGCCGAGGCATGGACATTGAGCGTGTGAACATCGCCTTCAACTATGACATGCCAGAGGACTCGGACACCTACCTGCACCGGGTGGCCAGAGCAGGCCGGTTTGGCACCAAGGGCTTGGCCATCACATTTGTATCTGATGAGAGCGATGCTAAGATCCTCAATGATGTGCAGGACCGCTTCGAGGTCAACATCAGCGAGCTCCCTGATGAGATCGACATCTCCTCCTACATTGAGCAGACACGGTA</Hsp_hseq> + <Hsp_midline>||||||||||| | |||||||| ||||| || |||| ||||| || || |||| |||| |||| ||| | || ||||| | ||||||||| ||||||| ||||| || |||||||||||||| ||||| || ||||| ||||| ||||| ||| | || |||||||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||| || || || || |||||||| || |||||| | ||||| ||| || |||||| | || ||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||| || ||||||||||| | ||||||||| | ||||| || || ||||| |||||||||||||| || || || |||||||||||||||| || |||| |||||||| || ||||| || || || || | ||||| | |||| | | ||| ||| | | || |||||| | |||||||||||||||||||||| || ||||| |||||||| |||||||| ||||| || || ||| |||| || || ||||||||| |||||||||||| || ||||||||||| || |||||||| || ||| | ||||||||||| ||||| |||||| | || |||||||| ||||||||| | ||||||||||| ||||||| |||||||| ||||| || |||| ||||||||||| ||||||||||| || | ||||| || ||||| ||||||||| | ||||| || ||||| |||||||| ||||| |||||||||||||| || ||||||||||||||||| ||||| || |||||||| |||||| ||||||||||| | || || || |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||||||| ||||| || ||||||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||| | || || || ||||||||||| ||| | |||||||| ||||| ||||| |||| ||||| || ||||||||||| || |||||||| || || || || | || || || || || |||||||||||| | ||||| ||||||| |||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +</Iteration_hits> + <Iteration_stat> + <Statistics> + <Statistics_db-num>4087430</Statistics_db-num> + <Statistics_db-len>7559748470</Statistics_db-len> + <Statistics_hsp-len>0</Statistics_hsp-len> + <Statistics_eff-space>0</Statistics_eff-space> + <Statistics_kappa>0.41</Statistics_kappa> + <Statistics_lambda>0.625</Statistics_lambda> + <Statistics_entropy>0.78</Statistics_entropy> + </Statistics> + </Iteration_stat> +</Iteration> +</BlastOutput_iterations> +</BlastOutput> + diff --git a/styles/notebook.css b/styles/notebook.css index d51208e..4de6354 100644 --- a/styles/notebook.css +++ b/styles/notebook.css @@ -31,14 +31,14 @@ div.text_cell_render{ .prompt{ display: None; } -.text_cell_render h5 { +.text_cell_render .exercise { font-weight: 300; - font-size: 22pt; + /*font-size: 22pt;*/ color: #4057A1; font-style: italic; - margin-bottom: .5em; + /*margin-bottom: .5em; margin-top: 0.5em; - display: block; + display: block;*/ } .warning{ diff --git a/styles/notebook.css.small b/styles/notebook.css.small index 5d5ae4c..a17cb13 100644 --- a/styles/notebook.css.small +++ b/styles/notebook.css.small @@ -31,14 +31,14 @@ div.text_cell_render{ .prompt{ display: None; } -.text_cell_render h5 { +.text_cell_render .exercise { font-weight: 300; - font-size: 22pt; + /*font-size: 22pt;*/ color: #4057A1; font-style: italic; - margin-bottom: .5em; + /*margin-bottom: .5em; margin-top: 0.5em; - display: block; + display: block;*/ } .warning{ -- GitLab