diff --git a/PaintingPandas.ipynb b/PaintingPandas.ipynb index 9a8cd8ff161c0e70457de353a97361c4a376c13e..76c5435c04262775fd16ff2c4d2384fe33059895 100644 --- a/PaintingPandas.ipynb +++ b/PaintingPandas.ipynb @@ -2,7 +2,7 @@ "metadata": { "celltoolbar": "Slideshow", "name": "", - "signature": "sha256:e3a9c2db1ada7191abdcfbc0a9c2f98d21b831cf50379d3e2dab9393c30cb164" + "signature": "sha256:c960d1a8def7b2e949731bbbf428cf4136ae762f97e72489fd64795f06833637" }, "nbformat": 3, "nbformat_minor": 0, @@ -18,11 +18,16 @@ }, "source": [ "\n", - "More on IPython and Python libraries making science peanuts..\n", + "Python Data Analysis and more IPython\n", "===\n", + "***\n", "\n", - "Lecture by: Wai Yi Leung < <w.y.leung@lumc.nl> >\n", - "\n" + "[Wai Yi Leung](mailto:w.y.leung@lumc.nl), [Sequencing Analysis Support Core, Leiden University Medical Center](http://sasc.lumc.nl)\n", + "\n", + "Based on: [Pandas Tutorials Lessons 1,2,3,6](http://pandas.pydata.org/pandas-docs/stable/tutorials.html), [Seaborn Colorpalettes](http://web.stanford.edu/~mwaskom/software/seaborn/tutorial/color_palettes.html)\n", + "\n", + "\n", + "License: [Creative Commons Attribution 3.0 License (CC-by)](http://creativecommons.org/licenses/by/3.0)" ] }, { @@ -49,9 +54,7 @@ }, "source": [ "Pandas\n", - "===\n", - "\n", - "* The ultimate carpenters toolkit for bio-informaticians" + "===\n" ] }, { @@ -194,8 +197,8 @@ "input": [ "# Sample dataset\n", "participants = ['Andrew', 'Bruno', 'Christine', 'Don', 'Esther', \n", - " 'Frans', 'Ginny', 'Hendrik', 'Ivar', 'John', 'Karl', \n", - " 'Lotte', 'Marjolijn', 'Nora', 'Olivia', 'Paula', 'Quinta', 'Renatta']\n", + " 'Frans', 'Giselle', 'Hendrik', 'Ivar', 'John', 'Karl', \n", + " 'Lotte', 'Marjolein', 'Nora', 'Olivia', 'Paula', 'Quinta', 'Renatta']\n", "grades = [70, 65, 81, 73, 85, 35, 62, 60, 14, 64, 72, 75, 92, 84, 67, 72, 85, 82]\n", "sex = ['M','M','F','M','F','M','F','M','M','M','M', 'F', 'F', 'F', 'F', 'F', 'F', 'F']\n", "university = ['AU', 'NL', 'NL', 'AU', 'DE', 'DE', 'NL', 'NL', 'DE', 'AU', 'DE', 'NL', 'NL', 'AU', 'AU', 'DE', 'AU', 'DE']" @@ -207,7 +210,7 @@ } }, "outputs": [], - "prompt_number": 2 + "prompt_number": 4 }, { "cell_type": "markdown", @@ -1370,11 +1373,58 @@ "Acknowledgements\n", "===\n", "\n", - "* Pandas - \n", "* Martijn Vermaat for organizing this course\n", "\n", "(c) 2014 - Wai Yi Leung " ] + }, + { + "cell_type": "code", + "collapsed": false, + "input": [ + "\n", + "from IPython.core.display import HTML\n", + "def custom_style():\n", + " style = open('styles/notebook.css', 'r').read()\n", + " return HTML('<style>' + style + '</style>')\n", + "def custom_script():\n", + " script = open('styles/notebook.js', 'r').read()\n", + " return HTML('<script>' + script + '</script>')\n", + "\n", + "custom_style()\n", + "\n", + "custom_script()" + ], + "language": "python", + "metadata": {}, + "outputs": [ + { + "html": [ + "<script>// https://github.com/CamDavidsonPilon/Probabilistic-Programming-and-Bayesian-Methods-for-Hackers\n", + "MathJax.Hub.Config({\n", + " TeX: {\n", + " extensions: [\"AMSmath.js\"]\n", + " },\n", + " tex2jax: {\n", + " inlineMath: [ ['$','$'], [\"\\\\(\",\"\\\\)\"] ],\n", + " displayMath: [ ['$$','$$'], [\"\\\\[\",\"\\\\]\"] ]\n", + " },\n", + " displayAlign: 'center', // Change this to 'center' to center equations.\n", + " \"HTML-CSS\": {\n", + " styles: {'.MathJax_Display': {\"margin\": 4}}\n", + " }\n", + " });\n", + "</script>" + ], + "metadata": {}, + "output_type": "pyout", + "prompt_number": 2, + "text": [ + "<IPython.core.display.HTML at 0x1fb7050>" + ] + } + ], + "prompt_number": 2 } ], "metadata": {}