Merge requests · biowdl / tasks

add SomaticSeq

!74 · created Nov 22, 2018 by Ruben Vorderman develop
- MERGED
- 20
updated Nov 26, 2018
Move all files to version 1.0

!34 · created Jul 23, 2018 by Ruben Vorderman develop
- MERGED
- 4
updated Jul 23, 2018
Some new tasks and memory setting changes

!70 · created Nov 01, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Nov 07, 2018
Added struct

!65 · created Oct 08, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Oct 09, 2018
Extra tasks required for assembly.

!10 · created May 07, 2018 by Ruben Vorderman
- MERGED
- 6
updated May 07, 2018
Add Various new tasks 4 of 4 checklist items completed

!40 · created Jul 27, 2018 by Ruben Vorderman develop
- MERGED
- 2
updated Jul 31, 2018
Add yamltojson task.

!77 · created Nov 27, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Nov 27, 2018
Add gffcompare

!71 · created Nov 12, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Nov 12, 2018
Fixing small issues

!58 · created Sep 03, 2018 by Ruben Vorderman develop
- MERGED
- 4
updated Sep 03, 2018
Add gffread task

!73 · created Nov 15, 2018 by Ruben Vorderman develop
- MERGED
- 1
updated Nov 15, 2018
fix CaseControl and macs2 tasks

!67 · created Oct 09, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Oct 16, 2018
Add CPAT

!72 · created Nov 13, 2018 by Ruben Vorderman develop
- MERGED
- 4
updated Nov 13, 2018
Fixed defaults

!57 · created Aug 29, 2018 by Ruben Vorderman develop
- MERGED
- 2
updated Aug 29, 2018
fixed fastqc call-caching

!68 · created Oct 19, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Oct 22, 2018
Fixed -U arg

!59 · created Sep 03, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Sep 03, 2018
Make optional values mandatory where appropriate

!36 · created Jul 24, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Jul 26, 2018
Add multiqc

!75 · created Nov 23, 2018 by Ruben Vorderman develop
- MERGED
- 11
updated Nov 23, 2018