Merge requests · biowdl / tasks

Update stringtie.wdl

!79 · created Dec 04, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Dec 06, 2018
Add argument for filtering on MAPQ (alignment quality) for View task

!80 · created Dec 04, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Dec 05, 2018
Macs2 biocontainer

!78 · created Nov 29, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Dec 03, 2018
Add yamltojson task.

!77 · created Nov 27, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Nov 27, 2018
update docs to V0.1

!76 · created Nov 26, 2018 by Ruben Vorderman gh-pages
- MERGED
- 0
updated Nov 26, 2018
add SomaticSeq

!74 · created Nov 22, 2018 by Ruben Vorderman develop
- MERGED
- 20
updated Nov 26, 2018
Add multiqc

!75 · created Nov 23, 2018 by Ruben Vorderman develop
- MERGED
- 11
updated Nov 23, 2018
Add gffread task

!73 · created Nov 15, 2018 by Ruben Vorderman develop
- MERGED
- 1
updated Nov 15, 2018
Add CPAT

!72 · created Nov 13, 2018 by Ruben Vorderman develop
- MERGED
- 4
updated Nov 13, 2018
Add gffcompare

!71 · created Nov 12, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Nov 12, 2018
Some new tasks and memory setting changes

!70 · created Nov 01, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Nov 07, 2018
increase memory on bamstats

!69 · created Oct 25, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Oct 25, 2018
fixed fastqc call-caching

!68 · created Oct 19, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Oct 22, 2018
fix CaseControl and macs2 tasks

!67 · created Oct 09, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Oct 16, 2018
Fixing names

!66 · created Oct 09, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Oct 09, 2018
Added struct

!65 · created Oct 08, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Oct 09, 2018
Added CaseControl tool

!64 · created Sep 26, 2018 by Ruben Vorderman develop
- MERGED
- 4
updated Sep 27, 2018
remove link creation from CombineGVCFs

!63 · created Sep 24, 2018 by Ruben Vorderman develop
- MERGED
- 0
updated Sep 24, 2018
Switch to structs

!61 · created Sep 10, 2018 by Ruben Vorderman develop
- MERGED
- 3
updated Sep 18, 2018
Add bamstats

!62 · created Sep 12, 2018 by Ruben Vorderman develop
- MERGED
- 1
updated Sep 12, 2018