From fe987d91759823b09e75eca5738679dc405d3a36 Mon Sep 17 00:00:00 2001
From: DavyCats <davycats.dc@gmail.com>
Date: Wed, 4 Apr 2018 16:37:33 +0200
Subject: [PATCH] typo
---
fastqc.wdl | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/fastqc.wdl b/fastqc.wdl
index e526c1e..968c4a4 100644
--- a/fastqc.wdl
+++ b/fastqc.wdl
@@ -70,7 +70,7 @@ task extractAdapters {
command {
set -e
mkdir -p ${outputDir}
- java -Xmx$${true=""+memory false="4" defined(memory)}G -jar ${extractAdaptersFastqcJar} \
+ java -Xmx${true=""+memory false="4" defined(memory)}G -jar ${extractAdaptersFastqcJar} \
--inputFile ${inputFile} \
${"--adapterOutputFile " + adapterOutputFilePath } \
${"--contamsOutputFile " + contamsOutputFilePath } \
--
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