diff --git a/picard.wdl b/picard.wdl index 2a0121dc4d9d678d86414a6da609386c48bf7184..b78e60397da063549140fa94d42b6eece0d8538f 100644 --- a/picard.wdl +++ b/picard.wdl @@ -328,6 +328,7 @@ task CreateSequenceDictionary { set -e mkdir -p "$(dirname ~{outputDir})" picard -Xmx~{javaXmx} \ + -XX:ParallelGCThreads=1 \ CreateSequenceDictionary \ REFERENCE=~{inputFile} \ OUTPUT="~{outputDir}/~{basenameInputFile}.dict"