diff --git a/CHANGELOG.md b/CHANGELOG.md index c20e0d6af2a771a89955581defe8fbbf71804e44..09418cc8bcc938212efa6ca434cd342021dc1649 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -9,9 +9,13 @@ This document is user facing. Please word the changes in such a way that users understand how the changes affect the new version. --> +version 2.2.0-dev +--------------------------- ++ Update TALON default image to version 4.4.1. + version 2.1.0 --------------------------- -+ Make intervals optional for GATK CombineGVCFs ++ Make intervals optional for GATK CombineGVCFs. + Updated biowdl-input-converter version. + GATK CombineGVCFs memory was tripled to prevent it from using a lot of CPU in Garbage Collection mode. diff --git a/talon.wdl b/talon.wdl index 9d3b5304fb5bc0bf665e289fce6aca86a7c85220..9c426e55bbeede608afd9e0640c5b40f2e4a4d9a 100644 --- a/talon.wdl +++ b/talon.wdl @@ -32,7 +32,7 @@ task CreateAbundanceFileFromDatabase { Int cores = 1 String memory = "4G" - String dockerImage = "biocontainers/talon:v4.4_cv1" + String dockerImage = "biocontainers/talon:v4.4.1_cv1" } command { @@ -102,7 +102,7 @@ task CreateGtfFromDatabase { Int cores = 1 String memory = "4G" - String dockerImage = "biocontainers/talon:v4.4_cv1" + String dockerImage = "biocontainers/talon:v4.4.1_cv1" } command { @@ -174,7 +174,7 @@ task FilterTalonTranscripts { Int cores = 1 String memory = "4G" - String dockerImage = "biocontainers/talon:v4.4_cv1" + String dockerImage = "biocontainers/talon:v4.4.1_cv1" } command { @@ -227,7 +227,7 @@ task GetReadAnnotations { Int cores = 1 String memory = "4G" - String dockerImage = "biocontainers/talon:v4.4_cv1" + String dockerImage = "biocontainers/talon:v4.4.1_cv1" } command { @@ -287,7 +287,7 @@ task InitializeTalonDatabase { Int cores = 1 String memory = "10G" - String dockerImage = "biocontainers/talon:v4.4_cv1" + String dockerImage = "biocontainers/talon:v4.4.1_cv1" } command { @@ -360,7 +360,7 @@ task ReformatGtf { Int cores = 1 String memory = "4G" - String dockerImage = "biocontainers/talon:v4.4_cv1" + String dockerImage = "biocontainers/talon:v4.4.1_cv1" } command { @@ -397,7 +397,7 @@ task SummarizeDatasets { Int cores = 1 String memory = "4G" - String dockerImage = "biocontainers/talon:v4.4_cv1" + String dockerImage = "biocontainers/talon:v4.4.1_cv1" } command { @@ -458,7 +458,7 @@ task Talon { Int cores = 4 String memory = "20G" - String dockerImage = "biocontainers/talon:v4.4_cv1" + String dockerImage = "biocontainers/talon:v4.4.1_cv1" } command {