diff --git a/transcriptclean.wdl b/transcriptclean.wdl index 3870e682b3dd4f0694fb4c4dc3731e38f2ea416e..44cc35dcc5d57e08154dcddd18f89a44ac44744d 100644 --- a/transcriptclean.wdl +++ b/transcriptclean.wdl @@ -20,21 +20,6 @@ version 1.0 # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE # SOFTWARE. -workflow test { - input { - File GTFfile - File genomeFile - String outputPrefix - } - - call GetSJsFromGtf as GTFgen { - input: - GTFfile = GTFfile, - genomeFile = genomeFile, - outputPrefix = outputPrefix - } -} - task CleanSpliceJunctions { input { File SAMfile