From e6e88a0f5aeee178f646f3b9b3f1f0167de62796 Mon Sep 17 00:00:00 2001 From: Ruben Vorderman <r.h.p.vorderman@lumc.nl> Date: Mon, 25 Feb 2019 15:09:35 +0100 Subject: [PATCH] remove precommand --- multiqc.wdl | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/multiqc.wdl b/multiqc.wdl index 55b57cc..97a0ddb 100644 --- a/multiqc.wdl +++ b/multiqc.wdl @@ -39,8 +39,7 @@ task MultiQC { } command { - set -e -o pipefail - ~{preCommand} + set -e mkdir -p ~{outDir} multiqc \ ~{true="--force" false="" force} \ -- GitLab