From d6beeebaae1160d9577284c7ac08d9a5983ac5dd Mon Sep 17 00:00:00 2001
From: Ruben Vorderman <r.h.p.vorderman@lumc.nl>
Date: Wed, 20 Feb 2019 16:06:56 +0100
Subject: [PATCH] tabix uses its own container
---
samtools.wdl | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/samtools.wdl b/samtools.wdl
index f6241db..2c0e686 100644
--- a/samtools.wdl
+++ b/samtools.wdl
@@ -190,7 +190,7 @@ task Tabix {
input {
String inputFile
String type = "vcf"
- String dockerTag = "1.8--h46bd0b3_5"
+ String dockerTag = "0.2.6--ha92aebf_0"
}
command {
@@ -202,7 +202,7 @@ task Tabix {
}
runtime {
- docker: "quay.io/biocontainers/samtools:" + dockerTag
+ docker: "quay.io/biocontainers/tabix:" + dockerTag
}
}
--
GitLab