From d686e0870442c002b7902e9a8f33467dc404fa14 Mon Sep 17 00:00:00 2001
From: Ruben Vorderman <r.h.p.vorderman@lumc.nl>
Date: Mon, 16 Jan 2023 14:15:45 +0100
Subject: [PATCH] Add parameter_meta for targetFile
---
samtools.wdl | 1 +
1 file changed, 1 insertion(+)
diff --git a/samtools.wdl b/samtools.wdl
index 303f982..771a996 100644
--- a/samtools.wdl
+++ b/samtools.wdl
@@ -621,6 +621,7 @@ task View {
excludeFilter: {description: "Equivalent to samtools view's `-F` option.", category: "advanced"}
excludeSpecificFilter: {description: "Equivalent to samtools view's `-G` option.", category: "advanced"}
MAPQthreshold: {description: "Equivalent to samtools view's `-q` option.", category: "advanced"}
+ targetFile: {description: "A BED file with regions to include", caegory: "advanced"}
threads: {description: "The number of threads to use.", category: "advanced"}
memory: {description: "The amount of memory this job will use.", category: "advanced"}
timeMinutes: {description: "The maximum amount of time the job will run in minutes.", category: "advanced"}
--
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