From d17d5ca20d0ccb5da4e3ddc196890ffed3581f02 Mon Sep 17 00:00:00 2001
From: JasperBoom <jboom@infernum.nl>
Date: Tue, 14 Jan 2020 16:49:11 +0100
Subject: [PATCH] Update parameter_meta and fix womtool validate error.
---
centrifuge.wdl | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/centrifuge.wdl b/centrifuge.wdl
index 880d4c5..ec04a0b 100644
--- a/centrifuge.wdl
+++ b/centrifuge.wdl
@@ -230,7 +230,7 @@ task Classify {
task Inspect {
input {
- String printOption = fasta
+ String printOption = "fasta"
String indexBasename
String outputPrefix
@@ -265,11 +265,11 @@ task Inspect {
parameter_meta {
printOption: {
- description: "",
+ description: "The output option for inspect (fasta, summary, conversionTable, taxonomyTree, nameTable, sizeTable)",
category: "required"
}
indexBasename: {
- description: "",
+ description: "The basename of the index to be inspected.",
category: "required"
}
outputPrefix: {
@@ -277,7 +277,7 @@ task Inspect {
category: "required"
}
across: {
- description: "",
+ description: "When printing FASTA output, output a newline character every <int> bases.",
category: "common"
}
}
--
GitLab