diff --git a/macs2.wdl b/macs2.wdl index dd3226ac124f9fd6bfd443581308ebf41e6322a8..f0420c11667ace6a3fc58d57ba4e731debee196f 100644 --- a/macs2.wdl +++ b/macs2.wdl @@ -14,7 +14,7 @@ task PeakCalling { --treatment ${sep = ' ' bamFiles} \ --outdir ${outDir} + "/macs2/" \ --name ${sampleName} \ - ${default=false true='--nomodel' false='' nomodel} + ${true='--nomodel' false='' nomodel} } output {