From cce02b2a4038b26b3e2882ce403608f3e603be88 Mon Sep 17 00:00:00 2001
From: Ruben Vorderman <r.h.p.vorderman@lumc.nl>
Date: Thu, 12 Dec 2019 15:14:15 +0100
Subject: [PATCH] add parameter_meta
---
bedtools.wdl | 14 +++++++++++++-
1 file changed, 13 insertions(+), 1 deletion(-)
diff --git a/bedtools.wdl b/bedtools.wdl
index 9ebe46c..d3e9466 100644
--- a/bedtools.wdl
+++ b/bedtools.wdl
@@ -49,7 +49,7 @@ task Complement {
bedFile: {description: "The bedfile to complement",
category: "required"}
outputFile: {description: "The path to write the output to",
- catgory: "advanced"}
+ category: "advanced"}
dockerImage: {
description: "The docker image used for this task. Changing this may result in errors which the developers may choose not to address.",
category: "advanced"
@@ -79,6 +79,18 @@ task GetChromSizes {
runtime {
docker: dockerImage
}
+
+ parameter_meta {
+ faidx: {description: "The fasta index (.fai) file from which to extract the genome sizes",
+ category: "required"}
+ outputFile: {description: "The path to write the output to",
+ category: "advanced"}
+ dockerImage: {
+ description: "The docker image used for this task. Changing this may result in errors which the developers may choose not to address.",
+ category: "advanced"
+ }
+
+ }
}
task Sort {
--
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