diff --git a/bedtools.wdl b/bedtools.wdl index 9ebe46c591db59eb6595b6736ff981e478d46aa4..d3e9466faaffd6da5f8960dd46cbecef318fef41 100644 --- a/bedtools.wdl +++ b/bedtools.wdl @@ -49,7 +49,7 @@ task Complement { bedFile: {description: "The bedfile to complement", category: "required"} outputFile: {description: "The path to write the output to", - catgory: "advanced"} + category: "advanced"} dockerImage: { description: "The docker image used for this task. Changing this may result in errors which the developers may choose not to address.", category: "advanced" @@ -79,6 +79,18 @@ task GetChromSizes { runtime { docker: dockerImage } + + parameter_meta { + faidx: {description: "The fasta index (.fai) file from which to extract the genome sizes", + category: "required"} + outputFile: {description: "The path to write the output to", + category: "advanced"} + dockerImage: { + description: "The docker image used for this task. Changing this may result in errors which the developers may choose not to address.", + category: "advanced" + } + + } } task Sort {