diff --git a/biopet.wdl b/biopet.wdl index 8dd6e7870511741d62281ad79ab0c1ec94ad4d3d..545d6922f3f0391474b04943c3ccde713ab9ce92 100644 --- a/biopet.wdl +++ b/biopet.wdl @@ -76,7 +76,6 @@ task FastqSplitter { command { set -e -o pipefail ${preCommand} - for mkdir -p $(dirname ${sep=') $(dirname ' outputPaths}) if [ ${length(outputPaths)} -gt 1 ]; then java -jar ${toolJar} \