From c9657636bed7c7046e3799a0c3fca36473ae80e6 Mon Sep 17 00:00:00 2001
From: DavyCats <davycats.dc@gmail.com>
Date: Fri, 12 Nov 2021 10:07:54 +0100
Subject: [PATCH] increase gridss memory
---
gridss.wdl | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/gridss.wdl b/gridss.wdl
index 2e68ed8..13596a4 100644
--- a/gridss.wdl
+++ b/gridss.wdl
@@ -93,7 +93,7 @@ task GRIDSS {
File? blacklistBed
File? gridssProperties
- Int jvmHeapSizeGb = 85
+ Int jvmHeapSizeGb = 185
Int threads = 8
Int timeMinutes = ceil(4320 / threads) + 10
String dockerImage = "quay.io/biocontainers/gridss:2.12.2--h270b39a_0"
--
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