From c8d874812f45e10eded3f48979d69f6d81d7b90f Mon Sep 17 00:00:00 2001
From: JasperBoom <jboom@infernum.nl>
Date: Mon, 15 Jun 2020 10:49:45 +0200
Subject: [PATCH] Change new options to optional.
---
star.wdl | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/star.wdl b/star.wdl
index 6d80e9d..da90516 100644
--- a/star.wdl
+++ b/star.wdl
@@ -95,10 +95,10 @@ task Star {
String outFileNamePrefix
String outSAMtype = "BAM SortedByCoordinate"
String readFilesCommand = "zcat"
- Int outFilterScoreMin = 0
- Float outFilterScoreMinOverLread = 0.66
- Int outFilterMatchNmin = 0
- Float outFilterMatchNminOverLread = 0.66
+ Int? outFilterScoreMin
+ Float? outFilterScoreMinOverLread
+ Int? outFilterMatchNmin
+ Float? outFilterMatchNminOverLread
String? outStd
String? twopassMode = "Basic"
Array[String]? outSAMattrRGline
--
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