diff --git a/gridss.wdl b/gridss.wdl index 04ea2e822cbe29e027a46b148b8d9b7cd3dd677e..3b7859b653f93f8160ac5c79023d0480dd943f09 100644 --- a/gridss.wdl +++ b/gridss.wdl @@ -33,7 +33,7 @@ task GRIDSS { BwaIndex reference String outputPrefix = "gridss" - Int jvmHeapSizeGb = 1 + Int jvmHeapSizeGb = 30 Int threads = 1 String dockerImage = "quay.io/biocontainers/gridss:2.9.4--0" } @@ -63,7 +63,7 @@ task GRIDSS { runtime { cpu: threads - memory: "~{jvmHeapSizeGb}G" + memory: "~{jvmHeapSizeGb + 1}G" docker: dockerImage }