diff --git a/bam2fastx.wdl b/bam2fastx.wdl index 3cdb29fbd2230c87b1d97e578ec21bf3292d77cd..b09f7a0fb03f9deed29b68537e397dd2e88d3de9 100644 --- a/bam2fastx.wdl +++ b/bam2fastx.wdl @@ -111,7 +111,7 @@ task Bam2Fastq { -c ~{compressionLevel} \ ~{true="--split-barcodes" false="" splitByBarcode} \ ~{"--seqid-prefix " + seqIdPrefix} \ - ~{bam} + ~{sep=" " bam} } output {