diff --git a/samtools.wdl b/samtools.wdl index 4949569359e4b80a398b39c03f461cd26bb98429..5daf57ab3375ddb57193b4ad868268c755ddd079 100644 --- a/samtools.wdl +++ b/samtools.wdl @@ -209,7 +209,7 @@ task Flagstat { File inputBam String outputPath - String memory = "1G" + String memory = "256M" # Only 40.5 MiB used for 150G bam file. Int timeMinutes = 1 + ceil(size(inputBam, "G")) String dockerImage = "quay.io/biocontainers/samtools:1.8--h46bd0b3_5" }