diff --git a/bcftools.wdl b/bcftools.wdl index 589cddeadfa22b6c6f852f674caa6a265f5b8f12..2bf1c7323dad2b7c45ba1b91380e4f2396d80730 100644 --- a/bcftools.wdl +++ b/bcftools.wdl @@ -186,7 +186,7 @@ task Sort { String outputPath = "output.vcf.gz" String tmpDir = "./sorting-tmp" - String memory = "256M" + String memory = "5G" Int timeMinutes = 1 + ceil(size(inputFile, "G")) * 5 String dockerImage = "quay.io/biocontainers/bcftools:1.10.2--h4f4756c_2" }