From 8caea82e699644b269d572070e8e01685fd7c1b7 Mon Sep 17 00:00:00 2001
From: DavyCats <davycats.dc@gmail.com>
Date: Wed, 6 Jun 2018 12:48:23 +0200
Subject: [PATCH] fix glob issue
---
biopet.wdl | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/biopet.wdl b/biopet.wdl
index f9d2a6b..cc3a915 100644
--- a/biopet.wdl
+++ b/biopet.wdl
@@ -88,7 +88,8 @@ task FastqSplitter {
}
output {
- Array[File] outputFastqFiles = glob(outputPath + "/chunk_*/" + basename(inputFastq))
+ Array[File] chunkDirs = prefix(outputPath + "/chunk_", chunks)
+ String filename = basename(inputFastq)
}
}
--
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