From 8be79668994d0f5c6c73832db1b3fcbd6351a37e Mon Sep 17 00:00:00 2001
From: Ruben Vorderman <r.h.p.vorderman@lumc.nl>
Date: Tue, 11 Jan 2022 12:55:10 +0100
Subject: [PATCH] Correct output files
---
umi.wdl | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/umi.wdl b/umi.wdl
index 360405f..2a4bc9c 100644
--- a/umi.wdl
+++ b/umi.wdl
@@ -75,8 +75,8 @@ task BamReadNameToUmiTag {
>>>
output {
- File outputBam = outputBam
- File outputBamIndex = outputBamIndex
+ File outputBam = outputPath
+ File outputBamIndex = bamIndexPath
}
runtime {
--
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