diff --git a/gridss.wdl b/gridss.wdl index 14bc441ce149bb2e187579891488b4d3072ed046..3d4b7d7399c0ae759b8b5efd99bd0b6908450798 100644 --- a/gridss.wdl +++ b/gridss.wdl @@ -72,7 +72,7 @@ task GRIDSS { normalBam: {description: "The BAM file for the normal/control sample.", category: "advanced"} normalBai: {description: "The index for normalBam.", category: "advanced"} normalLabel: {description: "The name of the normal sample.", category: "advanced"} - BwaIndex reference: {description: "A BWA index, this should also include the fasta index file (.fai).", category: "required"} + reference: {description: "A BWA index, this should also include the fasta index file (.fai).", category: "required"} outputPrefix: {description: "The prefix for the output files. This may include parent directories.", category: "common"} threads: {description: "The number of the threads to use.", category: "advanced"}