diff --git a/picard.wdl b/picard.wdl index 4132754149ebcab5e777f2e9d90c4266cc38db4e..87243a10b64ac79ceccd0115f1b887c5b1983745 100644 --- a/picard.wdl +++ b/picard.wdl @@ -386,6 +386,7 @@ task SortVcf { Array[File]+ vcfFiles String outputVcf + File? sequenceDict Int memory = 4 Float memoryMultiplier = 3.0 @@ -401,6 +402,7 @@ task SortVcf { ~{toolCommand} \ SortVcf \ I=~{sep=" I=" vcfFiles} \ + ~{"SEQUENCE_DICTIONARY=" + sequenceDict} \ O=outputVcf }