diff --git a/umi-tools.wdl b/umi-tools.wdl index d1842c8a9064e658fec8e777595c702aba19278a..12ef9b4513fc856f94a4dbf7bfda69d903ca43a5 100644 --- a/umi-tools.wdl +++ b/umi-tools.wdl @@ -74,6 +74,8 @@ task Dedup { String statsPrefix = "stats" Boolean paired = true + String memory = "10G" + # Use a multi-package-container which includes umi_tools (0.5.5) and samtools (1.9) String dockerImage = "quay.io/biocontainers/mulled-v2-509311a44630c01d9cb7d2ac5727725f51ea43af:6089936aca6219b5bb5f54210ac5eb456c7503f2-0" } @@ -101,6 +103,7 @@ task Dedup { runtime { docker: dockerImage + memory: memory } parameter_meta {