diff --git a/multiqc.wdl b/multiqc.wdl index ef75aaa0818e1a0cf41c8803b937820fc7d59f1c..55b57cc86dfdba0998f9fb521e8db20869875fd8 100644 --- a/multiqc.wdl +++ b/multiqc.wdl @@ -2,7 +2,7 @@ version 1.0 task MultiQC { input { - String? preCommand + String dockerTag = "1.7--py_1" File analysisDirectory Array[File] dependencies # This must be used in order to run multiqc after these tasks. Boolean force = false @@ -83,4 +83,8 @@ task MultiQC { File multiqcReport = outDir + "/" + reportFilename + "_report.html" File multiqcDataDir = outDir + "/" +reportFilename + "_data" } + + runtime { + docker: "quay.io/biocontainers/multiqc:" + dockerTag + } }