diff --git a/gatk.wdl b/gatk.wdl index 82244caae738014f85af651bee114c5c425199e7..5cf7c6738bbb01b3017f41824b86f97aac263d69 100644 --- a/gatk.wdl +++ b/gatk.wdl @@ -1221,10 +1221,10 @@ task ModelSegments { copyRatioCBS: {description: "The posterior medians of the log2 copy ratio."} alleleFractionCBS: {description: "Minor-allele fraction."} unsmoothedModeledSegments: {description: "The initial modeled-segments result before segmentation smoothing."} - unsmoothedCopyRatioParameters: {description: "The initial copy-ratio-model global-parameter result before segmentation smoothing"} + unsmoothedCopyRatioParameters: {description: "The initial copy-ratio-model global-parameter result before segmentation smoothing."} unsmoothedAlleleFractionParameters: {description: "The initial allele-fraction-model global-parameter result before segmentation smoothing."} modeledSegments: {description: "The final modeled-segments result after segmentation smoothing."} - copyRatioParameters: {description: "The final copy-ratio-model global-parameter result after segmentation smoothing"} + copyRatioParameters: {description: "The final copy-ratio-model global-parameter result after segmentation smoothing."} alleleFractionParameters: {description: "The final allele-fraction-model global-parameter result after segmentation smoothing."} normalHetrozygousAllelicCounts: {description: "Allelic-counts file containing the counts at sites genotyped as heterozygous in the matched-normal sample."} } @@ -1766,7 +1766,7 @@ task VariantFiltration { dockerImage: {description: "The docker image used for this task. Changing this may result in errors which the developers may choose not to address.", category: "advanced"} # outputs - filteredVcf: {description: "A filtered VCF in which passing variants are annotated as PASS and failing variants are annotated with the name(s) of the filter(s) they failed. "} + filteredVcf: {description: "A filtered VCF in which passing variants are annotated as PASS and failing variants are annotated with the name(s) of the filter(s) they failed."} filteredVcfIndex: {description: "Index of filtered VCF."} } }