From 788e0553b742b04c6f274657676dfba8bcf9dbbe Mon Sep 17 00:00:00 2001
From: DavyCats <davycats.dc@gmail.com>
Date: Mon, 23 Jul 2018 13:00:16 +0200
Subject: [PATCH] add missing spaces in validateannotation
---
biopet.wdl | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/biopet.wdl b/biopet.wdl
index ec29318..8a23cf6 100644
--- a/biopet.wdl
+++ b/biopet.wdl
@@ -324,8 +324,8 @@ task ValidateAnnotation {
set -e -o pipefail
${preCommand}
${toolCommand} \
- ${"-r" + refRefflat} \
- ${"-g" + gtfFile} \
+ ${"-r " + refRefflat} \
+ ${"-g " + gtfFile} \
-R ${refFasta}
}
--
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