From 743e4e0615aa3568f391e65b3fc064e188a6f12e Mon Sep 17 00:00:00 2001
From: DavyCats <davycats.dc@gmail.com>
Date: Mon, 18 Jul 2022 15:35:42 +0200
Subject: [PATCH] fix linting issue
---
hmftools.wdl | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/hmftools.wdl b/hmftools.wdl
index 5a480f9..628e2f9 100644
--- a/hmftools.wdl
+++ b/hmftools.wdl
@@ -190,7 +190,7 @@ task CupGenerateReport {
command {
set -e
mkdir -p ./workdir ~{outputDir}
- ln -s -t workdir ~{sep=" " cupData}
+ ln -s -t workdir ~{cupData}
CupGenerateReport \
~{sampleName} \
workdir/
--
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