From 72ad1f1b4c6123a72518de01e36c0ba6a79657bb Mon Sep 17 00:00:00 2001
From: cagaser <c.agaser@lumc.nl>
Date: Mon, 12 Oct 2020 16:21:06 +0200
Subject: [PATCH] add tmpDir to parameter_meta section
---
bcftools.wdl | 1 +
1 file changed, 1 insertion(+)
diff --git a/bcftools.wdl b/bcftools.wdl
index 63f2cac..a0aeb44 100644
--- a/bcftools.wdl
+++ b/bcftools.wdl
@@ -161,6 +161,7 @@ task Sort {
parameter_meta {
inputFile: {description: "A vcf or bcf file.", category: "required"}
outputPath: {description: "The location the output VCF file should be written.", category: "common"}
+ tmpDir: {description: "The location of the temporary files during the bcftools sorting.", category: "advanced"}
memory: {description: "The amount of memory this job will use.", category: "advanced"}
timeMinutes: {description: "The maximum amount of time the job will run in minutes.", category: "advanced"}
dockerImage: {description: "The docker image used for this task. Changing this may result in errors which the developers may choose not to address.", category: "advanced"}
--
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