From 5388c793b0ba81b1db3d7a725d47e954103c4c5e Mon Sep 17 00:00:00 2001
From: DavyCats <davycats.dc@gmail.com>
Date: Wed, 12 Feb 2020 15:01:30 +0100
Subject: [PATCH] fix CombineVariants docker image
---
gatk.wdl | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/gatk.wdl b/gatk.wdl
index 78d7a19..f4ec4f3 100644
--- a/gatk.wdl
+++ b/gatk.wdl
@@ -467,7 +467,7 @@ task CombineVariants {
String memory = "24G"
String javaXmx = "12G"
- String dockerImage = "quay.io/biocontainers/gatk4:4.1.0.0--0"
+ String dockerImage = "broadinstitute/gatk3:3.8-1"
}
command <<<
--
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