From 4a32a443a29e324b8b01fac1fdbc01a7f2078f79 Mon Sep 17 00:00:00 2001
From: DavyCats <davycats.dc@gmail.com>
Date: Wed, 7 Jul 2021 09:39:47 +0200
Subject: [PATCH] increase memory repeatmasker
---
gridss.wdl | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/gridss.wdl b/gridss.wdl
index f137f96..ad230d0 100644
--- a/gridss.wdl
+++ b/gridss.wdl
@@ -161,7 +161,7 @@ task GridssAnnotateVcfRepeatmasker {
File gridssVcfIndex
String outputPath = "./gridss.repeatmasker_annotated.vcf.gz"
- String memory = "4G"
+ String memory = "50G"
String dockerImage = "quay.io/biocontainers/gridss:2.12.0--h270b39a_1"
Int timeMinutes = 2880
}
--
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