From 4760d1873df4204bb64c38f6d6c8378c41568b46 Mon Sep 17 00:00:00 2001
From: DavyCats <davycats.dc@gmail.com>
Date: Tue, 13 Oct 2020 10:08:58 +0200
Subject: [PATCH] remove redundant G in -Xmx in snpeff
---
snpeff.wdl | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/snpeff.wdl b/snpeff.wdl
index 95383b9..079a720 100644
--- a/snpeff.wdl
+++ b/snpeff.wdl
@@ -24,7 +24,7 @@ task SnpEff {
set -e
mkdir -p "$(dirname ~{outputPath})"
unzip ~{datadirZip}
- snpEff -Xmx~{javaXmx}G -XX:ParallelGCThreads=1 \
+ snpEff -Xmx~{javaXmx} -XX:ParallelGCThreads=1 \
-v \
~{genomeVersion} \
-noDownload \
--
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