From 3e95c762ffa3fa43ca4b269a5fdde85ad293ebdf Mon Sep 17 00:00:00 2001
From: DavyCats <davycats.dc@gmail.com>
Date: Wed, 15 Aug 2018 16:37:13 +0200
Subject: [PATCH] fix regex
---
gatk.wdl | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/gatk.wdl b/gatk.wdl
index 3d4bf92..1f76099 100644
--- a/gatk.wdl
+++ b/gatk.wdl
@@ -373,7 +373,7 @@ task SplitNCigarReads {
output {
File bam = outputBam
- File bamIndex = sub(outputBam, "\\.bam$", ".bai")
+ File bamIndex = sub(outputBam, "\.bam$", ".bai")
}
runtime {
--
GitLab